Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001295753.1 splicing factor 3B subunit 1 isoform 3 [Homo sapiens] ... Query length: 154 aa

hypothetical protein DDB_G0293190 ...

hypothetical protein DDB_G0293190 [Dictyostelium discoideum AX4]

333 aa protein

accession:XP_629356.1

Alignment Sequence Identical proteins

LOW QUALITY PROTEIN: splicing factor 3B subunit 1 ...

LOW QUALITY PROTEIN: splicing factor 3B subunit 1 [Glycine max]

1261 aa protein

accession:XP_003541702.2

Alignment Sequence Identical proteins

U2 snRNP-associated protein SF3B1 ...

U2 snRNP-associated protein SF3B1 [Schizosaccharomyces pombe]

1166 aa protein

accession:NP_594538.2

Alignment Sequence Identical proteins

splicing factor 3B subunit 1 isoform X4 ...

splicing factor 3B subunit 1 isoform X4 [Danio rerio]

146 aa protein

accession:XP_068079757.1

Alignment Sequence Identical proteins

Query: splicing factor 3B subunit 1 isoform 3 ...

splicing factor 3B subunit 1 isoform 3 [Homo sapiens]

154 aa protein

accession:NP_001295753.1

Sequence Identical proteins

splicing factor 3B subunit 1 isoform X2 ...

splicing factor 3B subunit 1 isoform X2 [Rattus norvegicus]

144 aa protein

accession:XP_063123847.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063123847.1\|	splicing factor 3B subunit 1 isoform X2 [Rattus norvegicus]	283	283	90%	6e-99	100.00%	XP_063123847.1
2 Select seq ref\|XP_068079757.1\|	splicing factor 3B subunit 1 isoform X4 [Danio rerio]	206	206	90%	9e-69	80.99%	XP_068079757.1
3 Select seq ref\|XP_003541702.2\|	LOW QUALITY PROTEIN: splicing factor 3B subunit 1 [Glycine max]	58.5	58.5	68%	1e-09	40.00%	XP_003541702.2
4 Select seq ref\|NP_594538.2\|	U2 snRNP-associated protein SF3B1 [Schizosaccharomyces pombe]	38.9	38.9	57%	0.005	33.00%	NP_594538.2
5 Select seq ref\|XP_629356.1\|	hypothetical protein DDB_G0293190 [Dictyostelium discoideum AX4]	37.7	37.7	35%	0.011	37.50%	XP_629356.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments