Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001298052.2
short transient receptor potential channel 1 isoform 2 [Mus musculus]
...
Query length:
759 aa
DOMAINS: and other(s) domains
...
short transient receptor potential channel 1
...
short transient receptor potential channel 1 [Danio rerio]
796 aa protein
accession:NP_001185590.1
short transient receptor potential channel 1 isoform 2
...
short transient receptor potential channel 1 isoform 2 [Homo sapiens]
759 aa protein
accession:NP_003295.1
short transient receptor potential channel 1 isoform 1
...
short transient receptor potential channel 1 isoform 1 [Homo sapiens]
793 aa protein
accession:NP_001238774.1
Query: short transient receptor potential channel 1 isoform 2
...
short transient receptor potential channel 1 isoform 2 [Mus musculus]
759 aa protein
accession:NP_001298052.2
short transient receptor potential channel 1 isoform 1
...
short transient receptor potential channel 1 isoform 1 [Mus musculus]
793 aa protein
accession:NP_035773.2
short transient receptor potential channel 1 isoform 4
...
short transient receptor potential channel 1 isoform 4 [Mus musculus]
752 aa protein
accession:NP_001400281.1
DOMAINS: and other(s) domains
...
short transient receptor potential channel 1 [Danio rerio]
796 aa protein
accession:NP_001185590.1
short transient receptor potential channel 1 isoform 2 [Homo sapiens]
759 aa protein
accession:NP_003295.1
short transient receptor potential channel 1 isoform 1 [Homo sapiens]
793 aa protein
accession:NP_001238774.1
short transient receptor potential channel 1 isoform 2 [Mus musculus]
759 aa protein
accession:NP_001298052.2
short transient receptor potential channel 1 isoform 1 [Mus musculus]
793 aa protein
accession:NP_035773.2
short transient receptor potential channel 1 isoform 4 [Mus musculus]
752 aa protein
accession:NP_001400281.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1575 | 1575 | 100% | 0.0 | 99.74% | NP_003295.1 | |
| 2 | 1560 | 1560 | 100% | 0.0 | 95.71% | NP_035773.2 | |
| 3 | 1289 | 1289 | 100% | 0.0 | 78.75% | NP_001185590.1 | |
| 4 | 1560 | 1560 | 100% | 0.0 | 95.46% | NP_001238774.1 | |
| 5 | 1555 | 1555 | 100% | 0.0 | 99.08% | NP_001400281.1 |