Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001307495.1 probable splicing factor YJU2B isoform b [Homo sapiens] ... Query length: 251 aa

Coiled-coil domain-containing protein 130 homolog ...

Coiled-coil domain-containing protein 130 homolog [Caenorhabditis elegans]

369 aa protein

accession:NP_496077.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG15084 ...

uncharacterized protein Dmel_CG15084 [Drosophila melanogaster]

316 aa protein

accession:NP_611383.1

Alignment Sequence Identical proteins

probable splicing factor YJU2B ...

probable splicing factor YJU2B [Danio rerio]

390 aa protein

accession:NP_991158.2

Alignment Sequence Identical proteins

probable splicing factor YJU2B isoform X2 ...

probable splicing factor YJU2B isoform X2 [Mus musculus]

321 aa protein

accession:XP_006531379.1

Alignment Sequence Identical proteins

Query: probable splicing factor YJU2B isoform b ...

probable splicing factor YJU2B isoform b [Homo sapiens]

251 aa protein

accession:NP_001307495.1

Sequence Identical proteins

probable splicing factor YJU2B isoform c ...

probable splicing factor YJU2B isoform c [Homo sapiens]

347 aa protein

accession:NP_001307498.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001307498.1\|	probable splicing factor YJU2B isoform c [Homo sapiens]	506	506	100%	0.0	100.00%	NP_001307498.1
2 Select seq ref\|XP_006531379.1\|	probable splicing factor YJU2B isoform X2 [Mus musculus]	285	285	100%	5e-95	66.80%	XP_006531379.1
3 Select seq ref\|NP_991158.2\|	probable splicing factor YJU2B [Danio rerio]	159	159	99%	2e-45	40.31%	NP_991158.2
4 Select seq ref\|NP_611383.1\|	uncharacterized protein Dmel_CG15084 [Drosophila melanogaster]	83.2	83.2	61%	2e-17	36.13%	NP_611383.1
5 Select seq ref\|NP_496077.1\|	Coiled-coil domain-containing protein 130 homolog [Caenorhabditis elegans]	62.4	62.4	44%	6e-10	33.63%	NP_496077.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments