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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_001310544.1 nonsense-mediated mRNA decay factor SMG5 isoform 3 [Homo sapiens] ... Query length: 970 aa
PIN domain-containing protein ...
PIN domain-containing protein [Caenorhabditis elegans]
1219 aa protein
accession:NP_001367726.1
protein SMG7-like ...
protein SMG7-like [Glycine max]
957 aa protein
accession:XP_040865305.1
nonsense-mediated mRNA decay factor SMG7 isoform 2 ...
nonsense-mediated mRNA decay factor SMG7 isoform 2 [Rattus norvegicus]
1187 aa protein
accession:NP_001402667.1
nonsense-mediated mRNA decay factor SMG7 isoform X1 ...
nonsense-mediated mRNA decay factor SMG7 isoform X1 [Homo sapiens]
1216 aa protein
accession:XP_047291697.1
Query: nonsense-mediated mRNA decay factor SMG5 isoform 3 ...
nonsense-mediated mRNA decay factor SMG5 isoform 3 [Homo sapiens]
970 aa protein
accession:NP_001310544.1
Smg5 nonsense mediated mRNA decay factor, isoform C ...
Smg5 nonsense mediated mRNA decay factor, isoform C [Drosophila melanogaster]
1177 aa protein
accession:NP_001285914.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
Smg5 nonsense mediated mRNA decay factor, isoform C [Drosophila melanogaster]
103 250 66% 2e-2126.46% NP_001285914.1
2
protein SMG7-like [Glycine max]
88.2 88.2 28% 9e-1727.05% XP_040865305.1
3
nonsense-mediated mRNA decay factor SMG7 isoform 2 [Rattus norvegicus]
85.5 125 42% 7e-1626.67% NP_001402667.1
4
nonsense-mediated mRNA decay factor SMG7 isoform X1 [Homo sapiens]
84.3 125 42% 2e-1526.67% XP_047291697.1
5
PIN domain-containing protein [Caenorhabditis elegans]
65.9 65.9 20% 9e-1024.55% NP_001367726.1