Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001323001.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
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Query length:
129 aa
DOMAINS: and other(s) domains
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mRNA splicing or mRNA surveillance facor
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mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
RNA-binding motif protein, X chromosome isoform X1
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RNA-binding motif protein, X chromosome isoform X1 [Danio rerio]
374 aa protein
accession:XP_017214473.1
Query: RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
129 aa protein
accession:NP_001323001.1
serine/arginine-rich splicing factor SR45a isoform X2
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serine/arginine-rich splicing factor SR45a isoform X2 [Glycine max]
145 aa protein
accession:XP_040868022.1
RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
207 aa protein
accession:NP_001329705.1
DOMAINS: and other(s) domains
...
mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
RNA-binding motif protein, X chromosome isoform X1 [Danio rerio]
374 aa protein
accession:XP_017214473.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
129 aa protein
accession:NP_001323001.1
serine/arginine-rich splicing factor SR45a isoform X2 [Glycine max]
145 aa protein
accession:XP_040868022.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
207 aa protein
accession:NP_001329705.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 152 | 152 | 70% | 1e-47 | 72.53% | XP_040868022.1 | |
| 2 | 117 | 117 | 68% | 2e-33 | 60.23% | NP_001329705.1 | |
| 3 | 76.6 | 76.6 | 62% | 1e-16 | 47.50% | XP_629578.1 | |
| 4 | 73.9 | 73.9 | 74% | 8e-16 | 38.54% | NP_001342863.1 | |
| 5 | 65.1 | 65.1 | 68% | 2e-12 | 34.83% | XP_017214473.1 |