Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001323003.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
...
Query length:
233 aa
DOMAINS: and other(s) domains
...
heterogeneous nuclear ribonucleoprotein D0
...
heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
314 aa protein
accession:NP_001103930.1
RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
mRNA splicing or mRNA surveillance facor
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mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
serine/arginine-rich splicing factor SR45a isoform X4
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serine/arginine-rich splicing factor SR45a isoform X4 [Glycine max]
140 aa protein
accession:XP_040868024.1
Query: RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
233 aa protein
accession:NP_001323003.1
RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
207 aa protein
accession:NP_001329705.1
DOMAINS: and other(s) domains
...
heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
314 aa protein
accession:NP_001103930.1
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
serine/arginine-rich splicing factor SR45a isoform X4 [Glycine max]
140 aa protein
accession:XP_040868024.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
233 aa protein
accession:NP_001323003.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
207 aa protein
accession:NP_001329705.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 136 | 136 | 35% | 5e-40 | 72.29% | XP_040868024.1 | |
| 2 | 115 | 115 | 35% | 9e-31 | 63.41% | NP_001329705.1 | |
| 3 | 79.0 | 79.0 | 37% | 2e-16 | 46.59% | XP_629578.1 | |
| 4 | 74.7 | 74.7 | 42% | 6e-15 | 39.39% | NP_001342863.1 | |
| 5 | 65.5 | 65.5 | 39% | 1e-11 | 39.78% | NP_001103930.1 |