Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001323004.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
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Query length:
203 aa
DOMAINS: and other(s) domains
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heterogeneous nuclear ribonucleoprotein D0
...
heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
314 aa protein
accession:NP_001103930.1
serine/arginine-rich splicing factor SR45a isoform X4
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serine/arginine-rich splicing factor SR45a isoform X4 [Glycine max]
140 aa protein
accession:XP_040868024.1
RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
mRNA splicing or mRNA surveillance facor
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mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
Query: RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
203 aa protein
accession:NP_001323004.1
RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
233 aa protein
accession:NP_001323003.1
DOMAINS: and other(s) domains
...
heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
314 aa protein
accession:NP_001103930.1
serine/arginine-rich splicing factor SR45a isoform X4 [Glycine max]
140 aa protein
accession:XP_040868024.1
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
mRNA splicing or mRNA surveillance facor [Schizosaccharomyces pombe]
297 aa protein
accession:NP_001342863.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
203 aa protein
accession:NP_001323004.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
233 aa protein
accession:NP_001323003.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 415 | 415 | 100% | 1e-148 | 100.00% | NP_001323003.1 | |
| 2 | 137 | 137 | 40% | 3e-40 | 72.29% | XP_040868024.1 | |
| 3 | 79.0 | 79.0 | 43% | 4e-16 | 46.59% | XP_629578.1 | |
| 4 | 74.3 | 74.3 | 48% | 1e-14 | 39.39% | NP_001342863.1 | |
| 5 | 65.1 | 65.1 | 45% | 3e-11 | 39.78% | NP_001103930.1 |