Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001326163.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
...
Query length:
532 aa
DOMAINS: and other(s) domains
...
probable E3 ubiquitin-protein ligase HERC1 isoform X3
...
probable E3 ubiquitin-protein ligase HERC1 isoform X3 [Danio rerio]
4859 aa protein
accession:XP_009301515.1
probable E3 ubiquitin-protein ligase HERC1 isoform X2
...
probable E3 ubiquitin-protein ligase HERC1 isoform X2 [Mus musculus]
4884 aa protein
accession:XP_006511167.1
probable E3 ubiquitin-protein ligase HERC1 isoform X20
...
probable E3 ubiquitin-protein ligase HERC1 isoform X20 [Homo sapiens]
4878 aa protein
accession:XP_047289194.1
ultraviolet-B receptor UVR8
...
ultraviolet-B receptor UVR8 [Glycine max]
535 aa protein
accession:XP_003551939.1
Query: Regulator of chromosome condensation (RCC1) family protein
...
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
532 aa protein
accession:NP_001326163.1
Regulator of chromosome condensation (RCC1) family protein
...
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
432 aa protein
accession:NP_001326162.1
DOMAINS: and other(s) domains
...
probable E3 ubiquitin-protein ligase HERC1 isoform X3 [Danio rerio]
4859 aa protein
accession:XP_009301515.1
probable E3 ubiquitin-protein ligase HERC1 isoform X2 [Mus musculus]
4884 aa protein
accession:XP_006511167.1
probable E3 ubiquitin-protein ligase HERC1 isoform X20 [Homo sapiens]
4878 aa protein
accession:XP_047289194.1
ultraviolet-B receptor UVR8 [Glycine max]
535 aa protein
accession:XP_003551939.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
532 aa protein
accession:NP_001326163.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
432 aa protein
accession:NP_001326162.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 898 | 898 | 99% | 0.0 | 79.96% | XP_003551939.1 | |
| 2 | 897 | 897 | 81% | 0.0 | 100.00% | NP_001326162.1 | |
| 3 | 139 | 449 | 80% | 2e-33 | 29.29% | XP_009301515.1 | |
| 4 | 137 | 440 | 82% | 1e-32 | 29.17% | XP_006511167.1 | |
| 5 | 137 | 445 | 80% | 2e-32 | 29.38% | XP_047289194.1 |