Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001327782.1
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana]
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Query length:
1379 aa
DOMAINS: and other(s) domains
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splicing factor 3B subunit 3
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splicing factor 3B subunit 3 [Rattus norvegicus]
1217 aa protein
accession:NP_001099657.2
splicing factor 3B subunit 3
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splicing factor 3B subunit 3 [Homo sapiens]
1217 aa protein
accession:NP_036558.3
splicing factor 3B subunit 3
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splicing factor 3B subunit 3 [Danio rerio]
1217 aa protein
accession:NP_998668.1
splicing factor 3B subunit 3 isoform X2
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splicing factor 3B subunit 3 isoform X2 [Glycine max]
1373 aa protein
accession:XP_006577113.1
Query: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
...
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana]
1379 aa protein
accession:NP_001327782.1
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
...
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana]
1365 aa protein
accession:NP_001327783.1
DOMAINS: and other(s) domains
...
splicing factor 3B subunit 3 [Rattus norvegicus]
1217 aa protein
accession:NP_001099657.2
splicing factor 3B subunit 3 [Homo sapiens]
1217 aa protein
accession:NP_036558.3
splicing factor 3B subunit 3 [Danio rerio]
1217 aa protein
accession:NP_998668.1
splicing factor 3B subunit 3 isoform X2 [Glycine max]
1373 aa protein
accession:XP_006577113.1
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana]
1379 aa protein
accession:NP_001327782.1
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana]
1365 aa protein
accession:NP_001327783.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2805 | 2805 | 100% | 0.0 | 98.98% | NP_001327783.1 | |
| 2 | 1659 | 1659 | 97% | 0.0 | 62.78% | XP_006577113.1 | |
| 3 | 123 | 123 | 34% | 1e-26 | 25.47% | NP_001099657.2 | |
| 4 | 123 | 123 | 34% | 1e-26 | 25.47% | NP_036558.3 | |
| 5 | 119 | 119 | 33% | 1e-25 | 25.69% | NP_998668.1 |