Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001328898.1
Ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana]
...
Query length:
315 aa
DOMAINS: and other(s) domains
...
ubiquitin recognition factor in ER-associated degradation protein 1
...
ubiquitin recognition factor in ER-associated degradation protein 1 [Rattus norvegicus]
307 aa protein
accession:NP_445870.1
ubiquitin recognition factor in ER-associated degradation protein 1 isoform C
...
ubiquitin recognition factor in ER-associated degradation protein 1 isoform C [Homo sapiens]
302 aa protein
accession:NP_001349839.1
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2
...
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2 [Mus musculus]
302 aa protein
accession:XP_006522069.1
ubiquitin fusion degradation protein 1 homolog
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ubiquitin fusion degradation protein 1 homolog [Glycine max]
316 aa protein
accession:XP_003525232.1
Query: Ubiquitin fusion degradation UFD1 family protein
...
Ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana]
315 aa protein
accession:NP_001328898.1
Ubiquitin fusion degradation UFD1 family protein
...
Ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana]
311 aa protein
accession:NP_001328897.1
DOMAINS: and other(s) domains
...
ubiquitin recognition factor in ER-associated degradation protein 1 [Rattus norvegicus]
307 aa protein
accession:NP_445870.1
ubiquitin recognition factor in ER-associated degradation protein 1 isoform C [Homo sapiens]
302 aa protein
accession:NP_001349839.1
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2 [Mus musculus]
302 aa protein
accession:XP_006522069.1
ubiquitin fusion degradation protein 1 homolog [Glycine max]
316 aa protein
accession:XP_003525232.1
Ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana]
315 aa protein
accession:NP_001328898.1
Ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana]
311 aa protein
accession:NP_001328897.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 641 | 641 | 100% | 0.0 | 98.73% | NP_001328897.1 | |
| 2 | 448 | 448 | 100% | 2e-158 | 69.91% | XP_003525232.1 | |
| 3 | 254 | 254 | 95% | 2e-82 | 45.42% | NP_445870.1 | |
| 4 | 254 | 254 | 95% | 3e-82 | 45.42% | XP_006522069.1 | |
| 5 | 252 | 252 | 95% | 2e-81 | 45.10% | NP_001349839.1 |