Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001334138.1
transformer-2 protein homolog alpha isoform 2 [Mus musculus]
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Query length:
280 aa
DOMAINS: and other(s) domains
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RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
326 aa protein
accession:XP_642304.1
cold-inducible RNA-binding protein isoform X1
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cold-inducible RNA-binding protein isoform X1 [Rattus norvegicus]
176 aa protein
accession:XP_063120373.1
transformer-2 protein homolog alpha isoform X1
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transformer-2 protein homolog alpha isoform X1 [Danio rerio]
296 aa protein
accession:XP_005170064.1
transformer-2 protein homolog alpha isoform X1
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transformer-2 protein homolog alpha isoform X1 [Homo sapiens]
181 aa protein
accession:XP_047276240.1
Query: transformer-2 protein homolog alpha isoform 2
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transformer-2 protein homolog alpha isoform 2 [Mus musculus]
280 aa protein
accession:NP_001334138.1
transformer-2 protein homolog alpha isoform 19
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transformer-2 protein homolog alpha isoform 19 [Mus musculus]
280 aa protein
accession:NP_001393061.1
DOMAINS: and other(s) domains
...
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
326 aa protein
accession:XP_642304.1
cold-inducible RNA-binding protein isoform X1 [Rattus norvegicus]
176 aa protein
accession:XP_063120373.1
transformer-2 protein homolog alpha isoform X1 [Danio rerio]
296 aa protein
accession:XP_005170064.1
transformer-2 protein homolog alpha isoform X1 [Homo sapiens]
181 aa protein
accession:XP_047276240.1
transformer-2 protein homolog alpha isoform 2 [Mus musculus]
280 aa protein
accession:NP_001334138.1
transformer-2 protein homolog alpha isoform 19 [Mus musculus]
280 aa protein
accession:NP_001393061.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 527 | 527 | 100% | 0.0 | 99.64% | NP_001393061.1 | |
| 2 | 340 | 340 | 64% | 4e-119 | 97.81% | XP_047276240.1 | |
| 3 | 239 | 239 | 90% | 2e-77 | 77.21% | XP_005170064.1 | |
| 4 | 110 | 110 | 34% | 2e-27 | 48.96% | XP_642304.1 | |
| 5 | 87.4 | 87.4 | 26% | 5e-20 | 58.90% | XP_063120373.1 |