Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001337149.1 nonsense-mediated mRNA decay factor SMG7 isoform 8 [Homo sapiens] ... Query length: 1216 aa

protein SMG7 ...

protein SMG7 [Glycine max]

974 aa protein

accession:XP_003529483.1

Alignment Sequence Identical proteins

Telomerase activating protein Est1 ...

Telomerase activating protein Est1 [Arabidopsis thaliana]

1059 aa protein

accession:NP_001190336.1

Alignment Sequence Identical proteins

nonsense-mediated mRNA decay factor SMG7 isoform X1 ...

nonsense-mediated mRNA decay factor SMG7 isoform X1 [Danio rerio]

1180 aa protein

accession:XP_005171365.1

Alignment Sequence Identical proteins

nonsense-mediated mRNA decay factor SMG7 isoform 1 ...

nonsense-mediated mRNA decay factor SMG7 isoform 1 [Mus musculus]

1146 aa protein

accession:NP_001153729.1

Alignment Sequence Identical proteins

Query: nonsense-mediated mRNA decay factor SMG7 isoform 8 ...

nonsense-mediated mRNA decay factor SMG7 isoform 8 [Homo sapiens]

1216 aa protein

accession:NP_001337149.1

Sequence Identical proteins

nonsense-mediated mRNA decay factor SMG7 isoform 10 ...

nonsense-mediated mRNA decay factor SMG7 isoform 10 [Homo sapiens]

1187 aa protein

accession:NP_001362513.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001362513.1\|	nonsense-mediated mRNA decay factor SMG7 isoform 10 [Homo sapiens]	2429	2429	96%	0.0	99.92%	NP_001362513.1
2 Select seq ref\|NP_001153729.1\|	nonsense-mediated mRNA decay factor SMG7 isoform 1 [Mus musculus]	2245	2245	98%	0.0	92.30%	NP_001153729.1
3 Select seq ref\|XP_005171365.1\|	nonsense-mediated mRNA decay factor SMG7 isoform X1 [Danio rerio]	1414	1414	97%	0.0	67.36%	XP_005171365.1
4 Select seq ref\|XP_003529483.1\|	protein SMG7 [Glycine max]	134	134	35%	2e-30	26.79%	XP_003529483.1
5 Select seq ref\|NP_001190336.1\|	Telomerase activating protein Est1 [Arabidopsis thaliana]	131	131	35%	2e-29	25.98%	NP_001190336.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments