Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
...
Query length:
398 aa
DOMAINS: and other(s) domains
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clathrin heavy chain 1 isoform X1
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clathrin heavy chain 1 isoform X1 [Danio rerio]
1684 aa protein
accession:XP_005157481.1
clathrin heavy chain 1
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clathrin heavy chain 1 [Glycine max]
1706 aa protein
accession:XP_003518313.1
clathrin heavy chain linker domain-containing protein 1 isoform X5
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clathrin heavy chain linker domain-containing protein 1 isoform X5 [Rattus norvegicus]
519 aa protein
accession:XP_063129058.1
clathrin heavy chain linker domain-containing protein 1 isoform 1
...
clathrin heavy chain linker domain-containing protein 1 isoform 1 [Mus musculus]
596 aa protein
accession:NP_082780.1
Query: clathrin heavy chain linker domain-containing protein 1 isoform 3
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clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
398 aa protein
accession:NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 4
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clathrin heavy chain linker domain-containing protein 1 isoform 4 [Homo sapiens]
520 aa protein
accession:NP_001340709.1
DOMAINS: and other(s) domains
...
clathrin heavy chain 1 isoform X1 [Danio rerio]
1684 aa protein
accession:XP_005157481.1
clathrin heavy chain 1 [Glycine max]
1706 aa protein
accession:XP_003518313.1
clathrin heavy chain linker domain-containing protein 1 isoform X5 [Rattus norvegicus]
519 aa protein
accession:XP_063129058.1
clathrin heavy chain linker domain-containing protein 1 isoform 1 [Mus musculus]
596 aa protein
accession:NP_082780.1
clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
398 aa protein
accession:NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 4 [Homo sapiens]
520 aa protein
accession:NP_001340709.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 826 | 826 | 100% | 0.0 | 100.00% | NP_001340709.1 | |
| 2 | 577 | 577 | 100% | 0.0 | 69.85% | XP_063129058.1 | |
| 3 | 503 | 503 | 100% | 1e-174 | 55.82% | NP_082780.1 | |
| 4 | 67.8 | 67.8 | 40% | 1e-10 | 29.63% | XP_005157481.1 | |
| 5 | 61.2 | 61.2 | 37% | 1e-08 | 29.53% | XP_003518313.1 |