Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
...
Query length:
398 aa
DOMAINS: and other(s) domains
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clathrin heavy chain 1 isoform X1
...
clathrin heavy chain 1 isoform X1 [Danio rerio]
1684 aa protein
accession:XP_005157481.1
clathrin heavy chain 1
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clathrin heavy chain 1 [Glycine max]
1706 aa protein
accession:XP_003518313.1
clathrin heavy chain
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clathrin heavy chain [Saccharomyces cerevisiae S288C]
1653 aa protein
accession:NP_011309.1
clathrin heavy chain linker domain-containing protein 1 isoform 1
...
clathrin heavy chain linker domain-containing protein 1 isoform 1 [Mus musculus]
596 aa protein
accession:NP_082780.1
Query: clathrin heavy chain linker domain-containing protein 1 isoform 3
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clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
398 aa protein
accession:NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 4
...
clathrin heavy chain linker domain-containing protein 1 isoform 4 [Homo sapiens]
520 aa protein
accession:NP_001340709.1
DOMAINS: and other(s) domains
...
clathrin heavy chain 1 isoform X1 [Danio rerio]
1684 aa protein
accession:XP_005157481.1
clathrin heavy chain 1 [Glycine max]
1706 aa protein
accession:XP_003518313.1
clathrin heavy chain [Saccharomyces cerevisiae S288C]
1653 aa protein
accession:NP_011309.1
clathrin heavy chain linker domain-containing protein 1 isoform 1 [Mus musculus]
596 aa protein
accession:NP_082780.1
clathrin heavy chain linker domain-containing protein 1 isoform 3 [Homo sapiens]
398 aa protein
accession:NP_001340708.1
clathrin heavy chain linker domain-containing protein 1 isoform 4 [Homo sapiens]
520 aa protein
accession:NP_001340709.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 826 | 826 | 100% | 0.0 | 100.00% | NP_001340709.1 | |
| 2 | 503 | 503 | 100% | 1e-174 | 55.82% | NP_082780.1 | |
| 3 | 67.8 | 67.8 | 40% | 1e-10 | 29.63% | XP_005157481.1 | |
| 4 | 61.2 | 61.2 | 37% | 1e-08 | 29.53% | XP_003518313.1 | |
| 5 | 59.7 | 59.7 | 39% | 4e-08 | 30.77% | NP_011309.1 |