Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001341854.1 interferon regulatory factor 1 isoform 3 [Homo sapiens] ... Query length: 263 aa

interferon regulatory factor 4 isoform X2 ...

interferon regulatory factor 4 isoform X2 [Mus musculus]

393 aa protein

accession:XP_036013753.1

Alignment Sequence Identical proteins

interferon regulatory factor 2 isoform X2 ...

interferon regulatory factor 2 isoform X2 [Rattus norvegicus]

349 aa protein

accession:XP_063131304.1

Alignment Sequence Identical proteins

interferon regulatory factor 1b isoform X2 ...

interferon regulatory factor 1b isoform X2 [Danio rerio]

220 aa protein

accession:XP_068072034.1

Alignment Sequence Identical proteins

Query: interferon regulatory factor 1 isoform 3 ...

interferon regulatory factor 1 isoform 3 [Homo sapiens]

263 aa protein

accession:NP_001341854.1

Sequence Identical proteins

interferon regulatory factor 1 isoform X1 ...

interferon regulatory factor 1 isoform X1 [Homo sapiens]

294 aa protein

accession:XP_047273109.1

Alignment Sequence Identical proteins

interferon regulatory factor 1 isoform X3 ...

interferon regulatory factor 1 isoform X3 [Homo sapiens]

200 aa protein

accession:XP_047273110.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047273109.1\|	interferon regulatory factor 1 isoform X1 [Homo sapiens]	397	397	73%	8e-140	99.48%	XP_047273109.1
2 Select seq ref\|XP_068072034.1\|	interferon regulatory factor 1b isoform X2 [Danio rerio]	215	215	83%	3e-69	52.47%	XP_068072034.1
3 Select seq ref\|XP_063131304.1\|	interferon regulatory factor 2 isoform X2 [Rattus norvegicus]	196	196	85%	3e-60	48.52%	XP_063131304.1
4 Select seq ref\|XP_036013753.1\|	interferon regulatory factor 4 isoform X2 [Mus musculus]	113	113	44%	3e-28	42.24%	XP_036013753.1
5 Select seq ref\|XP_047273110.1\|	interferon regulatory factor 1 isoform X3 [Homo sapiens]	268	268	68%	2e-90	72.50%	XP_047273110.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments