Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001342225.1 origin recognition complex subunit 4 isoform 1 [Mus musculus] ... Query length: 433 aa

GspE family T2SS ATPase variant XcpR ...

GspE family T2SS ATPase variant XcpR [Pseudomonas]

502 aa protein

accession:WP_003091377.1

Alignment Sequence Identical proteins

conserved protein, unknown function ...

conserved protein, unknown function [Plasmodium falciparum 3D7]

983 aa protein

accession:XP_001350072.1

Alignment Sequence Identical proteins

origin recognition complex subunit 4 ...

origin recognition complex subunit 4 [Dictyostelium discoideum AX4]

440 aa protein

accession:XP_645616.1

Alignment Sequence Identical proteins

origin recognition complex subunit 4 ...

origin recognition complex subunit 4 [Saccharomyces cerevisiae S288C]

529 aa protein

accession:NP_015488.1

Alignment Sequence Identical proteins

Query: origin recognition complex subunit 4 isoform 1 ...

origin recognition complex subunit 4 isoform 1 [Mus musculus]

433 aa protein

accession:NP_001342225.1

Sequence Identical proteins

origin recognition complex subunit 4 isoform 3 ...

origin recognition complex subunit 4 isoform 3 [Mus musculus]

375 aa protein

accession:NP_001408195.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001408195.1\|	origin recognition complex subunit 4 isoform 3 [Mus musculus]	697	697	100%	0.0	82.45%	NP_001408195.1
2 Select seq ref\|XP_645616.1\|	origin recognition complex subunit 4 [Dictyostelium discoideum AX4]	137	137	96%	4e-35	26.08%	XP_645616.1
3 Select seq ref\|NP_015488.1\|	origin recognition complex subunit 4 [Saccharomyces cerevisiae S288C]	124	124	71%	3e-30	31.01%	NP_015488.1
4 Select seq ref\|XP_001350072.1\|	conserved protein, unknown function [Plasmodium falciparum 3D7]	51.2	51.2	14%	6e-06	40.62%	XP_001350072.1
5 Select seq ref\|WP_003091377.1\|	GspE family T2SS ATPase variant XcpR [Pseudomonas]	35.8	35.8	12%	0.33	39.39%	WP_003091377.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments