Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001343406.1 CCR4-NOT transcription complex subunit 8 [Mus musculus] ... Query length: 292 aa

CAF1 family protein ...

CAF1 family protein [Dictyostelium discoideum AX4]

367 aa protein

accession:XP_638651.1

Alignment Sequence Identical proteins

Pop2, isoform B ...

Pop2, isoform B [Drosophila melanogaster]

293 aa protein

accession:NP_729775.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 7 isoform 1 ...

CCR4-NOT transcription complex subunit 7 isoform 1 [Mus musculus]

285 aa protein

accession:NP_001258471.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 8 isoform X1 ...

CCR4-NOT transcription complex subunit 8 isoform X1 [Danio rerio]

285 aa protein

accession:XP_005173934.1

Alignment Sequence Identical proteins

Query: CCR4-NOT transcription complex subunit 8 ...

CCR4-NOT transcription complex subunit 8 [Mus musculus]

292 aa protein

accession:NP_001343406.1

Sequence Identical proteins

CCR4-NOT transcription complex subunit 8 isoform 1 ...

CCR4-NOT transcription complex subunit 8 isoform 1 [Homo sapiens]

292 aa protein

accession:NP_001288002.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001288002.1\|	CCR4-NOT transcription complex subunit 8 isoform 1 [Homo sapiens]	603	603	100%	0.0	99.32%	NP_001288002.1
2 Select seq ref\|XP_005173934.1\|	CCR4-NOT transcription complex subunit 8 isoform X1 [Danio rerio]	514	514	96%	0.0	85.11%	XP_005173934.1
3 Select seq ref\|NP_001258471.1\|	CCR4-NOT transcription complex subunit 7 isoform 1 [Mus musculus]	466	466	96%	2e-166	76.60%	NP_001258471.1
4 Select seq ref\|NP_729775.1\|	Pop2, isoform B [Drosophila melanogaster]	408	408	86%	2e-143	72.73%	NP_729775.1
5 Select seq ref\|XP_638651.1\|	CAF1 family protein [Dictyostelium discoideum AX4]	349	349	86%	4e-119	63.24%	XP_638651.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments