Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001348880.1
mediator of RNA polymerase II transcription subunit 1 isoform 5 [Mus musculus]
...
Query length:
584 aa
DOMAINS: and other(s) domains
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mediator complex subunit 1, isoform B
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mediator complex subunit 1, isoform B [Drosophila melanogaster]
1080 aa protein
accession:NP_001189153.1
Query: mediator of RNA polymerase II transcription subunit 1 isoform 5
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mediator of RNA polymerase II transcription subunit 1 isoform 5 [Mus musculus]
584 aa protein
accession:NP_001348880.1
mediator of RNA polymerase II transcription subunit 1 isoform 3
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mediator of RNA polymerase II transcription subunit 1 isoform 3 [Mus musculus]
1575 aa protein
accession:NP_001073587.1
mediator of RNA polymerase II transcription subunit 1
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mediator of RNA polymerase II transcription subunit 1 [Homo sapiens]
1581 aa protein
accession:NP_004765.2
mediator of RNA polymerase II transcription subunit 1 isoform X1
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mediator of RNA polymerase II transcription subunit 1 isoform X1 [Mus musculus]
570 aa protein
accession:XP_006532567.1
mediator of RNA polymerase II transcription subunit 1 isoform X2
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mediator of RNA polymerase II transcription subunit 1 isoform X2 [Danio rerio]
1769 aa protein
accession:XP_021336133.1
DOMAINS: and other(s) domains
...
mediator complex subunit 1, isoform B [Drosophila melanogaster]
1080 aa protein
accession:NP_001189153.1
mediator of RNA polymerase II transcription subunit 1 isoform 5 [Mus musculus]
584 aa protein
accession:NP_001348880.1
mediator of RNA polymerase II transcription subunit 1 isoform 3 [Mus musculus]
1575 aa protein
accession:NP_001073587.1
mediator of RNA polymerase II transcription subunit 1 [Homo sapiens]
1581 aa protein
accession:NP_004765.2
mediator of RNA polymerase II transcription subunit 1 isoform X1 [Mus musculus]
570 aa protein
accession:XP_006532567.1
mediator of RNA polymerase II transcription subunit 1 isoform X2 [Danio rerio]
1769 aa protein
accession:XP_021336133.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1157 | 1157 | 93% | 0.0 | 100.00% | NP_001073587.1 | |
| 2 | 1126 | 1126 | 93% | 0.0 | 96.71% | NP_004765.2 | |
| 3 | 787 | 787 | 93% | 0.0 | 68.56% | XP_021336133.1 | |
| 4 | 213 | 213 | 85% | 6e-58 | 30.16% | NP_001189153.1 | |
| 5 | 1135 | 1135 | 93% | 0.0 | 99.82% | XP_006532567.1 |