Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001350054.1 E3 ubiquitin-protein ligase MARCHF1 isoform 5 [Mus musculus] ... Query length: 281 aa

ubiquitin ligase Doa10 ...

ubiquitin ligase Doa10 [Schizosaccharomyces pombe]

1242 aa protein

accession:NP_596733.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase MARCHF8 isoform X3 ...

E3 ubiquitin-protein ligase MARCHF8 isoform X3 [Danio rerio]

559 aa protein

accession:XP_009305511.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase MARCHF1 isoform X6 ...

E3 ubiquitin-protein ligase MARCHF1 isoform X6 [Rattus norvegicus]

275 aa protein

accession:XP_063131583.1

Alignment Sequence Identical proteins

Query: E3 ubiquitin-protein ligase MARCHF1 isoform 5 ...

E3 ubiquitin-protein ligase MARCHF1 isoform 5 [Mus musculus]

281 aa protein

accession:NP_001350054.1

Sequence Identical proteins

E3 ubiquitin-protein ligase MARCHF1 isoform 3 ...

E3 ubiquitin-protein ligase MARCHF1 isoform 3 [Mus musculus]

285 aa protein

accession:NP_001390812.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase MARCHF1 isoform X1 ...

E3 ubiquitin-protein ligase MARCHF1 isoform X1 [Homo sapiens]

541 aa protein

accession:XP_047271825.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001390812.1\|	E3 ubiquitin-protein ligase MARCHF1 isoform 3 [Mus musculus]	576	576	100%	0.0	98.60%	NP_001390812.1
2 Select seq ref\|XP_063131583.1\|	E3 ubiquitin-protein ligase MARCHF1 isoform X6 [Rattus norvegicus]	478	478	91%	8e-172	89.66%	XP_063131583.1
3 Select seq ref\|XP_047271825.1\|	E3 ubiquitin-protein ligase MARCHF1 isoform X1 [Homo sapiens]	424	578	100%	7e-147	92.45%	XP_047271825.1
4 Select seq ref\|XP_009305511.1\|	E3 ubiquitin-protein ligase MARCHF8 isoform X3 [Danio rerio]	338	416	100%	8e-113	66.93%	XP_009305511.1
5 Select seq ref\|NP_596733.1\|	ubiquitin ligase Doa10 [Schizosaccharomyces pombe]	75.5	75.5	19%	3e-14	51.79%	NP_596733.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments