Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001352529.1
pre-mRNA-processing factor 40 homolog A isoform 8 [Homo sapiens]
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Query length:
934 aa
DOMAINS: and other(s) domains
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U1 snRNP-associated protein Prp40
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U1 snRNP-associated protein Prp40 [Schizosaccharomyces pombe]
695 aa protein
accession:NP_594966.1
pre-mRNA-processing protein 40A isoform X2
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pre-mRNA-processing protein 40A isoform X2 [Glycine max]
1008 aa protein
accession:XP_040869224.1
Pre-mRNA-processing factor 40 homolog B
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Pre-mRNA-processing factor 40 homolog B [Caenorhabditis elegans]
695 aa protein
accession:NP_001407496.1
Query: pre-mRNA-processing factor 40 homolog A isoform 8
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pre-mRNA-processing factor 40 homolog A isoform 8 [Homo sapiens]
934 aa protein
accession:NP_001352529.1
pre-mRNA-processing factor 40 homolog B isoform X9
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pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform X10
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pre-mRNA-processing factor 40 homolog B isoform X10 [Mus musculus]
880 aa protein
accession:XP_036015417.1
DOMAINS: and other(s) domains
...
U1 snRNP-associated protein Prp40 [Schizosaccharomyces pombe]
695 aa protein
accession:NP_594966.1
pre-mRNA-processing protein 40A isoform X2 [Glycine max]
1008 aa protein
accession:XP_040869224.1
Pre-mRNA-processing factor 40 homolog B [Caenorhabditis elegans]
695 aa protein
accession:NP_001407496.1
pre-mRNA-processing factor 40 homolog A isoform 8 [Homo sapiens]
934 aa protein
accession:NP_001352529.1
pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform X10 [Mus musculus]
880 aa protein
accession:XP_036015417.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 635 | 778 | 76% | 0.0 | 64.18% | XP_063120028.1 | |
| 2 | 609 | 751 | 63% | 0.0 | 71.83% | XP_036015417.1 | |
| 3 | 333 | 431 | 61% | 6e-101 | 42.96% | NP_001407496.1 | |
| 4 | 284 | 284 | 83% | 2e-80 | 30.99% | XP_040869224.1 | |
| 5 | 165 | 244 | 61% | 2e-41 | 26.53% | NP_594966.1 |