Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001354916.1 scavenger receptor class B member 1 isoform 9 [Homo sapiens] ... Query length: 440 aa

epithelial membrane protein, isoform E ...

epithelial membrane protein, isoform E [Drosophila melanogaster]

508 aa protein

accession:NP_001286873.1

Alignment Sequence Identical proteins

platelet glycoprotein 4 isoform X1 ...

platelet glycoprotein 4 isoform X1 [Homo sapiens]

472 aa protein

accession:XP_047276997.1

Alignment Sequence Identical proteins

platelet glycoprotein 4-like ...

platelet glycoprotein 4-like [Rattus norvegicus]

472 aa protein

accession:XP_063142971.1

Alignment Sequence Identical proteins

scavenger receptor class B member 1 ...

scavenger receptor class B member 1 [Danio rerio]

496 aa protein

accession:NP_944603.2

Alignment Sequence Identical proteins

Query: scavenger receptor class B member 1 isoform 9 ...

scavenger receptor class B member 1 isoform 9 [Homo sapiens]

440 aa protein

accession:NP_001354916.1

Sequence Identical proteins

scavenger receptor class B member 1 isoform 5 ...

scavenger receptor class B member 1 isoform 5 [Mus musculus]

490 aa protein

accession:NP_001411422.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001411422.1\|	scavenger receptor class B member 1 isoform 5 [Mus musculus]	620	620	91%	0.0	70.31%	NP_001411422.1
2 Select seq ref\|NP_944603.2\|	scavenger receptor class B member 1 [Danio rerio]	421	421	72%	2e-143	58.07%	NP_944603.2
3 Select seq ref\|XP_047276997.1\|	platelet glycoprotein 4 isoform X1 [Homo sapiens]	203	203	81%	2e-59	32.43%	XP_047276997.1
4 Select seq ref\|XP_063142971.1\|	platelet glycoprotein 4-like [Rattus norvegicus]	196	196	81%	1e-56	31.61%	XP_063142971.1
5 Select seq ref\|NP_001286873.1\|	epithelial membrane protein, isoform E [Drosophila melanogaster]	187	187	75%	9e-53	32.94%	NP_001286873.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments