Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001359282.1 CCR4-NOT transcription complex subunit 1 isoform 5 [Mus musculus] ... Query length: 2376 aa

CCR4-NOT transcription complex subunit let-711 ...

CCR4-NOT transcription complex subunit let-711 [Caenorhabditis elegans]

2624 aa protein

accession:NP_001368611.1

Alignment Sequence Identical proteins

Not1, isoform D ...

Not1, isoform D [Drosophila melanogaster]

2503 aa protein

accession:NP_001097243.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 1 ...

CCR4-NOT transcription complex subunit 1 [Danio rerio]

2374 aa protein

accession:NP_001073420.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 1 isoform a ...

CCR4-NOT transcription complex subunit 1 isoform a [Homo sapiens]

2376 aa protein

accession:NP_057368.3

Alignment Sequence Identical proteins

Query: CCR4-NOT transcription complex subunit 1 isoform 5 ...

CCR4-NOT transcription complex subunit 1 isoform 5 [Mus musculus]

2376 aa protein

accession:NP_001359282.1

Sequence Identical proteins

CCR4-NOT transcription complex subunit 1 isoform X1 ...

CCR4-NOT transcription complex subunit 1 isoform X1 [Mus musculus]

2383 aa protein

accession:XP_006530933.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	Ident	Accession
1 Select seq ref\|XP_006530933.1\|	CCR4-NOT transcription complex subunit 1 isoform X1 [Mus musculus]	4946	4946	100%	99.71%	XP_006530933.1
2 Select seq ref\|NP_057368.3\|	CCR4-NOT transcription complex subunit 1 isoform a [Homo sapiens]	4925	4925	100%	99.41%	NP_057368.3
3 Select seq ref\|NP_001073420.1\|	CCR4-NOT transcription complex subunit 1 [Danio rerio]	4385	4385	100%	89.73%	NP_001073420.1
4 Select seq ref\|NP_001097243.1\|	Not1, isoform D [Drosophila melanogaster]	2116	2116	99%	46.11%	NP_001097243.1
5 Select seq ref\|NP_001368611.1\|	CCR4-NOT transcription complex subunit let-711 [Caenorhabditis elegans]	1216	1362	81%	40.44%	NP_001368611.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments