Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001370157.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
309 aa
DOMAINS: and other(s) domains
...
collagen alpha-5(VI) chain isoform 1 precursor
...
collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
collagen alpha-3(VI) chain isoform X5
...
collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
309 aa protein
accession:NP_001370157.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
289 aa protein
accession:NP_871711.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
304 aa protein
accession:NP_001370098.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
304 aa protein
accession:NP_499408.1
DOMAINS: and other(s) domains
...
collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
309 aa protein
accession:NP_001370157.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
289 aa protein
accession:NP_871711.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
304 aa protein
accession:NP_001370098.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
304 aa protein
accession:NP_499408.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 357 | 357 | 100% | 5e-123 | 78.96% | NP_871711.1 | |
| 2 | 119 | 417 | 65% | 2e-28 | 39.67% | NP_001265227.1 | |
| 3 | 115 | 453 | 66% | 3e-27 | 35.52% | XP_017213295.2 | |
| 4 | 331 | 331 | 100% | 1e-112 | 77.74% | NP_001370098.1 | |
| 5 | 330 | 330 | 100% | 5e-112 | 77.42% | NP_499408.1 |