Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001380832.1 26S proteasome complex subunit SEM1 isoform f [Homo sapiens] ... Query length: 57 aa

proteasome regulatory particle lid subunit SEM1 ...

proteasome regulatory particle lid subunit SEM1 [Saccharomyces cerevisiae S288C]

89 aa protein

accession:NP_010651.3

Alignment Sequence Identical proteins

suppressor of exocyst mutations 1 ...

suppressor of exocyst mutations 1 [Drosophila melanogaster]

79 aa protein

accession:NP_652555.1

Alignment Sequence Identical proteins

26S proteasome complex subunit SEM1 ...

26S proteasome complex subunit SEM1 [Danio rerio]

70 aa protein

accession:NP_955887.1

Alignment Sequence Identical proteins

26S proteasome complex subunit SEM1 ...

26S proteasome complex subunit SEM1 [Rattus norvegicus]

70 aa protein

accession:NP_001119562.1

Alignment Sequence Identical proteins

Query: 26S proteasome complex subunit SEM1 isoform f ...

26S proteasome complex subunit SEM1 isoform f [Homo sapiens]

57 aa protein

accession:NP_001380832.1

Sequence Identical proteins

26S proteasome complex subunit SEM1 isoform b ...

26S proteasome complex subunit SEM1 isoform b [Homo sapiens]

89 aa protein

accession:NP_001380829.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001380829.1\|	26S proteasome complex subunit SEM1 isoform b [Homo sapiens]	113	113	100%	9e-34	100.00%	NP_001380829.1
2 Select seq ref\|NP_001119562.1\|	26S proteasome complex subunit SEM1 [Rattus norvegicus]	111	111	100%	3e-33	100.00%	NP_001119562.1
3 Select seq ref\|NP_955887.1\|	26S proteasome complex subunit SEM1 [Danio rerio]	107	107	100%	9e-32	96.49%	NP_955887.1
4 Select seq ref\|NP_652555.1\|	suppressor of exocyst mutations 1 [Drosophila melanogaster]	49.3	49.3	85%	2e-08	77.55%	NP_652555.1
5 Select seq ref\|NP_010651.3\|	proteasome regulatory particle lid subunit SEM1 [Saccharomyces cerevisiae S288C]	45.8	45.8	78%	5e-07	48.00%	NP_010651.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments