Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001382406.1
pre-mRNA-processing factor 40 homolog A isoform 14 [Homo sapiens]
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Query length:
915 aa
DOMAINS: and other(s) domains
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U1 snRNP-associated protein Prp40
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U1 snRNP-associated protein Prp40 [Schizosaccharomyces pombe]
695 aa protein
accession:NP_594966.1
pre-mRNA-processing protein 40A isoform X2
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pre-mRNA-processing protein 40A isoform X2 [Glycine max]
1008 aa protein
accession:XP_040869224.1
Pre-mRNA-processing factor 40 homolog B
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Pre-mRNA-processing factor 40 homolog B [Caenorhabditis elegans]
695 aa protein
accession:NP_001407496.1
Query: pre-mRNA-processing factor 40 homolog A isoform 14
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pre-mRNA-processing factor 40 homolog A isoform 14 [Homo sapiens]
915 aa protein
accession:NP_001382406.1
pre-mRNA-processing factor 40 homolog B isoform X9
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pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform X10
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pre-mRNA-processing factor 40 homolog B isoform X10 [Mus musculus]
880 aa protein
accession:XP_036015417.1
DOMAINS: and other(s) domains
...
U1 snRNP-associated protein Prp40 [Schizosaccharomyces pombe]
695 aa protein
accession:NP_594966.1
pre-mRNA-processing protein 40A isoform X2 [Glycine max]
1008 aa protein
accession:XP_040869224.1
Pre-mRNA-processing factor 40 homolog B [Caenorhabditis elegans]
695 aa protein
accession:NP_001407496.1
pre-mRNA-processing factor 40 homolog A isoform 14 [Homo sapiens]
915 aa protein
accession:NP_001382406.1
pre-mRNA-processing factor 40 homolog B isoform X9 [Rattus norvegicus]
889 aa protein
accession:XP_063120028.1
pre-mRNA-processing factor 40 homolog B isoform X10 [Mus musculus]
880 aa protein
accession:XP_036015417.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 641 | 783 | 77% | 0.0 | 64.61% | XP_063120028.1 | |
| 2 | 615 | 757 | 64% | 0.0 | 72.47% | XP_036015417.1 | |
| 3 | 338 | 437 | 62% | 3e-103 | 43.39% | NP_001407496.1 | |
| 4 | 283 | 283 | 85% | 2e-80 | 31.10% | XP_040869224.1 | |
| 5 | 171 | 250 | 61% | 3e-43 | 26.75% | NP_594966.1 |