Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001382409.1
pre-mRNA-processing factor 40 homolog A isoform 15 [Homo sapiens]
...
Query length:
877 aa
DOMAINS: and other(s) domains
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pre-mRNA-processing factor 40 homolog A
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pre-mRNA-processing factor 40 homolog A [Danio rerio]
851 aa protein
accession:NP_938170.1
pre-mRNA-processing factor 40 homolog A isoform X2
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pre-mRNA-processing factor 40 homolog A isoform X2 [Mus musculus]
858 aa protein
accession:XP_011237442.1
pre-mRNA-processing factor 40 homolog A isoform X4
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pre-mRNA-processing factor 40 homolog A isoform X4 [Rattus norvegicus]
988 aa protein
accession:XP_006234226.1
Query: pre-mRNA-processing factor 40 homolog A isoform 15
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pre-mRNA-processing factor 40 homolog A isoform 15 [Homo sapiens]
877 aa protein
accession:NP_001382409.1
pre-mRNA-processing factor 40 homolog A isoform 1
...
pre-mRNA-processing factor 40 homolog A isoform 1 [Homo sapiens]
930 aa protein
accession:NP_001382402.1
pre-mRNA-processing factor 40 homolog A isoform 18
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pre-mRNA-processing factor 40 homolog A isoform 18 [Homo sapiens]
994 aa protein
accession:NP_001382417.1
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog A [Danio rerio]
851 aa protein
accession:NP_938170.1
pre-mRNA-processing factor 40 homolog A isoform X2 [Mus musculus]
858 aa protein
accession:XP_011237442.1
pre-mRNA-processing factor 40 homolog A isoform X4 [Rattus norvegicus]
988 aa protein
accession:XP_006234226.1
pre-mRNA-processing factor 40 homolog A isoform 15 [Homo sapiens]
877 aa protein
accession:NP_001382409.1
pre-mRNA-processing factor 40 homolog A isoform 1 [Homo sapiens]
930 aa protein
accession:NP_001382402.1
pre-mRNA-processing factor 40 homolog A isoform 18 [Homo sapiens]
994 aa protein
accession:NP_001382417.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1790 | 1790 | 100% | 0.0 | 94.30% | NP_001382402.1 | |
| 2 | 1543 | 1543 | 91% | 0.0 | 89.56% | XP_011237442.1 | |
| 3 | 1343 | 1343 | 100% | 0.0 | 90.75% | XP_006234226.1 | |
| 4 | 828 | 828 | 95% | 0.0 | 64.07% | NP_938170.1 | |
| 5 | 1786 | 1786 | 100% | 0.0 | 94.30% | NP_001382417.1 |