Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001396713.1
ribosomal RNA small subunit methyltransferase NEP1 isoform 5 [Mus musculus]
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Query length:
160 aa
DOMAINS: and other(s) domains
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Ribosomal RNA small subunit methyltransferase nep-1
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Ribosomal RNA small subunit methyltransferase nep-1 [Caenorhabditis elegans]
231 aa protein
accession:NP_001379033.1
ribosomal RNA small subunit methyltransferase NEP1
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ribosomal RNA small subunit methyltransferase NEP1 [Danio rerio]
238 aa protein
accession:NP_001035427.1
ribosomal RNA small subunit methyltransferase NEP1 isoform 2
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ribosomal RNA small subunit methyltransferase NEP1 isoform 2 [Homo sapiens]
194 aa protein
accession:NP_001306978.1
ribosomal RNA small subunit methyltransferase NEP1
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ribosomal RNA small subunit methyltransferase NEP1 [Rattus norvegicus]
244 aa protein
accession:NP_001101358.2
Query: ribosomal RNA small subunit methyltransferase NEP1 isoform 5
...
ribosomal RNA small subunit methyltransferase NEP1 isoform 5 [Mus musculus]
160 aa protein
accession:NP_001396713.1
ribosomal RNA small subunit methyltransferase NEP1 isoform 3
...
ribosomal RNA small subunit methyltransferase NEP1 isoform 3 [Mus musculus]
194 aa protein
accession:NP_001396711.1
DOMAINS: and other(s) domains
...
Ribosomal RNA small subunit methyltransferase nep-1 [Caenorhabditis elegans]
231 aa protein
accession:NP_001379033.1
ribosomal RNA small subunit methyltransferase NEP1 [Danio rerio]
238 aa protein
accession:NP_001035427.1
ribosomal RNA small subunit methyltransferase NEP1 isoform 2 [Homo sapiens]
194 aa protein
accession:NP_001306978.1
ribosomal RNA small subunit methyltransferase NEP1 [Rattus norvegicus]
244 aa protein
accession:NP_001101358.2
ribosomal RNA small subunit methyltransferase NEP1 isoform 5 [Mus musculus]
160 aa protein
accession:NP_001396713.1
ribosomal RNA small subunit methyltransferase NEP1 isoform 3 [Mus musculus]
194 aa protein
accession:NP_001396711.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 312 | 312 | 100% | 2e-109 | 82.47% | NP_001396711.1 | |
| 2 | 276 | 276 | 100% | 3e-95 | 73.71% | NP_001306978.1 | |
| 3 | 277 | 277 | 100% | 1e-94 | 62.70% | NP_001101358.2 | |
| 4 | 178 | 178 | 75% | 1e-55 | 50.00% | NP_001035427.1 | |
| 5 | 140 | 140 | 88% | 7e-41 | 37.55% | NP_001379033.1 |