Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001400137.1 proteasome subunit beta type-9 isoform 5 [Mus musculus] ... Query length: 142 aa

Proteasome subunit beta ...

Proteasome subunit beta [Caenorhabditis elegans]

242 aa protein

accession:NP_500125.2

Alignment Sequence Identical proteins

proteasome subunit beta type 6 ...

proteasome subunit beta type 6 [Dictyostelium discoideum AX4]

214 aa protein

accession:XP_647188.1

Alignment Sequence Identical proteins

proteasome core particle subunit beta 1 Pre3 ...

proteasome core particle subunit beta 1 Pre3 [Schizosaccharomyces pombe]

226 aa protein

accession:NP_596295.1

Alignment Sequence Identical proteins

proteasome subunit beta type-9 precursor ...

proteasome subunit beta type-9 precursor [Homo sapiens]

219 aa protein

accession:NP_002791.1

Alignment Sequence Identical proteins

Query: proteasome subunit beta type-9 isoform 5 ...

proteasome subunit beta type-9 isoform 5 [Mus musculus]

142 aa protein

accession:NP_001400137.1

Sequence Identical proteins

proteasome subunit beta type-9 isoform 3 ...

proteasome subunit beta type-9 isoform 3 [Mus musculus]

196 aa protein

accession:NP_001400134.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001400134.1\|	proteasome subunit beta type-9 isoform 3 [Mus musculus]	295	295	100%	4e-103	100.00%	NP_001400134.1
2 Select seq ref\|NP_002791.1\|	proteasome subunit beta type-9 precursor [Homo sapiens]	271	271	100%	3e-93	90.14%	NP_002791.1
3 Select seq ref\|XP_647188.1\|	proteasome subunit beta type 6 [Dictyostelium discoideum AX4]	146	146	97%	4e-44	48.92%	XP_647188.1
4 Select seq ref\|NP_500125.2\|	Proteasome subunit beta [Caenorhabditis elegans]	108	108	95%	5e-29	37.50%	NP_500125.2
5 Select seq ref\|NP_596295.1\|	proteasome core particle subunit beta 1 Pre3 [Schizosaccharomyces pombe]	106	106	92%	1e-28	41.67%	NP_596295.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments