Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001400311.1
short transient receptor potential channel 1 isoform 13 [Homo sapiens]
...
Query length:
454 aa
DOMAINS: and other(s) domains
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short transient receptor potential channel 1 isoform 3
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short transient receptor potential channel 1 isoform 3 [Mus musculus]
786 aa protein
accession:NP_001400280.1
short transient receptor potential channel 1 isoform X1
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short transient receptor potential channel 1 isoform X1 [Rattus norvegicus]
828 aa protein
accession:XP_063122323.1
short transient receptor potential channel 1 isoform 1
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short transient receptor potential channel 1 isoform 1 [Mus musculus]
793 aa protein
accession:NP_035773.2
short transient receptor potential channel 1 isoform 1
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short transient receptor potential channel 1 isoform 1 [Homo sapiens]
793 aa protein
accession:NP_001238774.1
Query: short transient receptor potential channel 1 isoform 13
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short transient receptor potential channel 1 isoform 13 [Homo sapiens]
454 aa protein
accession:NP_001400311.1
short transient receptor potential channel 1 isoform 12
...
short transient receptor potential channel 1 isoform 12 [Homo sapiens]
552 aa protein
accession:NP_001400310.1
DOMAINS: and other(s) domains
...
short transient receptor potential channel 1 isoform 3 [Mus musculus]
786 aa protein
accession:NP_001400280.1
short transient receptor potential channel 1 isoform X1 [Rattus norvegicus]
828 aa protein
accession:XP_063122323.1
short transient receptor potential channel 1 isoform 1 [Mus musculus]
793 aa protein
accession:NP_035773.2
short transient receptor potential channel 1 isoform 1 [Homo sapiens]
793 aa protein
accession:NP_001238774.1
short transient receptor potential channel 1 isoform 13 [Homo sapiens]
454 aa protein
accession:NP_001400311.1
short transient receptor potential channel 1 isoform 12 [Homo sapiens]
552 aa protein
accession:NP_001400310.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 927 | 927 | 97% | 0.0 | 99.77% | NP_001400310.1 | |
| 2 | 567 | 908 | 97% | 0.0 | 91.95% | NP_001400280.1 | |
| 3 | 566 | 928 | 97% | 0.0 | 91.28% | XP_063122323.1 | |
| 4 | 567 | 930 | 97% | 0.0 | 92.86% | NP_001238774.1 | |
| 5 | 567 | 930 | 97% | 0.0 | 92.86% | NP_035773.2 |