Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001415203.1 CCR4-NOT transcription complex subunit 2 isoform 3 [Bos taurus] ... Query length: 520 aa

NOT2/NOT3/NOT5 C-terminal domain-containing protein ...

NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]

444 aa protein

accession:NP_494772.1

Alignment Sequence Identical proteins

regena, isoform C ...

regena, isoform C [Drosophila melanogaster]

579 aa protein

accession:NP_001287183.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 2 ...

CCR4-NOT transcription complex subunit 2 [Danio rerio]

520 aa protein

accession:NP_001082993.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 2 isoform c ...

CCR4-NOT transcription complex subunit 2 isoform c [Homo sapiens]

531 aa protein

accession:NP_001401582.1

Alignment Sequence Identical proteins

Query: CCR4-NOT transcription complex subunit 2 isoform 3 ...

CCR4-NOT transcription complex subunit 2 isoform 3 [Bos taurus]

520 aa protein

accession:NP_001415203.1

Sequence Identical proteins

CCR4-NOT transcription complex subunit 2 isoform a ...

CCR4-NOT transcription complex subunit 2 isoform a [Mus musculus]

540 aa protein

accession:NP_001032935.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001401582.1\|	CCR4-NOT transcription complex subunit 2 isoform c [Homo sapiens]	1078	1078	100%	0.0	100.00%	NP_001401582.1
2 Select seq ref\|NP_001032935.2\|	CCR4-NOT transcription complex subunit 2 isoform a [Mus musculus]	1076	1076	100%	0.0	99.81%	NP_001032935.2
3 Select seq ref\|NP_001082993.1\|	CCR4-NOT transcription complex subunit 2 [Danio rerio]	932	932	100%	0.0	87.57%	NP_001082993.1
4 Select seq ref\|NP_001287183.1\|	regena, isoform C [Drosophila melanogaster]	259	315	53%	3e-78	54.81%	NP_001287183.1
5 Select seq ref\|NP_494772.1\|	NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]	211	211	60%	2e-61	40.41%	NP_494772.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments