Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001416222.1
nuclear transcription factor Y subunit gamma isoform 1 [Rattus norvegicus]
...
Query length:
335 aa
DOMAINS: and other(s) domains
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CCAAT-binding factor complex histone fold subunit Php5
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CCAAT-binding factor complex histone fold subunit Php5 [Schizosaccharomyces pombe]
415 aa protein
accession:NP_596412.1
Hap5p
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Hap5p [Saccharomyces cerevisiae S288C]
242 aa protein
accession:NP_015003.1
nuclear factor Y transcription factor
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nuclear factor Y transcription factor [Glycine max]
258 aa protein
accession:NP_001349713.1
nuclear transcription factor Y subunit gamma isoform X3
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nuclear transcription factor Y subunit gamma isoform X3 [Danio rerio]
336 aa protein
accession:XP_009292655.1
Query: nuclear transcription factor Y subunit gamma isoform 1
...
nuclear transcription factor Y subunit gamma isoform 1 [Rattus norvegicus]
335 aa protein
accession:NP_001416222.1
nuclear transcription factor Y subunit gamma isoform 1
...
nuclear transcription factor Y subunit gamma isoform 1 [Mus musculus]
335 aa protein
accession:NP_001408207.1
DOMAINS: and other(s) domains
...
CCAAT-binding factor complex histone fold subunit Php5 [Schizosaccharomyces pombe]
415 aa protein
accession:NP_596412.1
Hap5p [Saccharomyces cerevisiae S288C]
242 aa protein
accession:NP_015003.1
nuclear factor Y transcription factor [Glycine max]
258 aa protein
accession:NP_001349713.1
nuclear transcription factor Y subunit gamma isoform X3 [Danio rerio]
336 aa protein
accession:XP_009292655.1
nuclear transcription factor Y subunit gamma isoform 1 [Rattus norvegicus]
335 aa protein
accession:NP_001416222.1
nuclear transcription factor Y subunit gamma isoform 1 [Mus musculus]
335 aa protein
accession:NP_001408207.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 649 | 649 | 100% | 0.0 | 99.40% | NP_001408207.1 | |
| 2 | 496 | 496 | 98% | 2e-177 | 86.19% | XP_009292655.1 | |
| 3 | 157 | 157 | 42% | 2e-45 | 52.98% | NP_001349713.1 | |
| 4 | 135 | 135 | 30% | 7e-37 | 58.33% | NP_015003.1 | |
| 5 | 129 | 129 | 32% | 3e-33 | 53.57% | NP_596412.1 |