Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001507.2 general transcription factor IIH subunit 3 isoform a [Homo sapiens] ... Query length: 308 aa

general transcription factor IIH, polypeptide 3 ...

general transcription factor IIH, polypeptide 3 [Dictyostelium discoideum AX4]

372 aa protein

accession:XP_643618.1

Alignment Sequence Identical proteins

transcription factor TFIIH complex subunit Tfb4 ...

transcription factor TFIIH complex subunit Tfb4 [Schizosaccharomyces pombe]

297 aa protein

accession:NP_595532.1

Alignment Sequence Identical proteins

transcription factor B4 ...

transcription factor B4 [Drosophila melanogaster]

299 aa protein

accession:NP_608574.2

Alignment Sequence Identical proteins

general transcription factor IIH subunit 3 ...

general transcription factor IIH subunit 3 [Danio rerio]

296 aa protein

accession:NP_001121894.1

Alignment Sequence Identical proteins

Query: general transcription factor IIH subunit 3 isoform a ...

general transcription factor IIH subunit 3 isoform a [Homo sapiens]

308 aa protein

accession:NP_001507.2

Sequence Identical proteins

general transcription factor IIH subunit 3 ...

general transcription factor IIH subunit 3 [Mus musculus]

309 aa protein

accession:NP_852075.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_852075.1\|	general transcription factor IIH subunit 3 [Mus musculus]	582	582	99%	0.0	93.51%	NP_852075.1
2 Select seq ref\|NP_001121894.1\|	general transcription factor IIH subunit 3 [Danio rerio]	434	434	95%	3e-153	70.07%	NP_001121894.1
3 Select seq ref\|NP_608574.2\|	transcription factor B4 [Drosophila melanogaster]	258	258	92%	5e-84	45.80%	NP_608574.2
4 Select seq ref\|NP_595532.1\|	transcription factor TFIIH complex subunit Tfb4 [Schizosaccharomyces pombe]	199	199	92%	4e-61	37.41%	NP_595532.1
5 Select seq ref\|XP_643618.1\|	general transcription factor IIH, polypeptide 3 [Dictyostelium discoideum AX4]	173	173	86%	5e-50	39.71%	XP_643618.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments