Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_002111.1
HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
...
Query length:
273 aa
DOMAINS: and other(s) domains
...
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor
...
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
Query: HLA class II histocompatibility antigen, DO beta chain precursor
...
HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
273 aa protein
accession:NP_002111.1
histocompatibility 2, O region beta locus precursor
...
histocompatibility 2, O region beta locus precursor [Mus musculus]
271 aa protein
accession:NP_034519.2
histocompatibility 2, O region beta locus isoform X1
...
histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
RT1 class II, DO beta isoform 1 precursor
...
RT1 class II, DO beta isoform 1 precursor [Rattus norvegicus]
272 aa protein
accession:NP_001008846.1
RT1 class II, DO beta isoform 2 precursor
...
RT1 class II, DO beta isoform 2 precursor [Rattus norvegicus]
246 aa protein
accession:NP_001399123.1
DOMAINS: and other(s) domains
...
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
273 aa protein
accession:NP_002111.1
histocompatibility 2, O region beta locus precursor [Mus musculus]
271 aa protein
accession:NP_034519.2
histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
RT1 class II, DO beta isoform 1 precursor [Rattus norvegicus]
272 aa protein
accession:NP_001008846.1
RT1 class II, DO beta isoform 2 precursor [Rattus norvegicus]
246 aa protein
accession:NP_001399123.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 424 | 424 | 99% | 2e-150 | 75.28% | NP_034519.2 | |
| 2 | 416 | 416 | 99% | 5e-147 | 74.54% | NP_001008846.1 | |
| 3 | 286 | 286 | 86% | 4e-96 | 62.87% | NP_001230891.1 | |
| 4 | 355 | 355 | 99% | 3e-123 | 66.05% | NP_001399123.1 | |
| 5 | 307 | 307 | 73% | 3e-105 | 74.00% | XP_006523749.1 |