Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_002111.1
HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
...
Query length:
273 aa
DOMAINS: and other(s) domains
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H-2 class II histocompatibility antigen, E-S beta chain isoform X1
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H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor
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HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
major histocompatibility complex, class II, DR beta 1 precursor
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major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
Query: HLA class II histocompatibility antigen, DO beta chain precursor
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HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
273 aa protein
accession:NP_002111.1
histocompatibility 2, O region beta locus precursor
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histocompatibility 2, O region beta locus precursor [Mus musculus]
271 aa protein
accession:NP_034519.2
histocompatibility 2, O region beta locus isoform X1
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histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
DOMAINS: and other(s) domains
...
H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
HLA class II histocompatibility antigen, DO beta chain precursor [Homo sapiens]
273 aa protein
accession:NP_002111.1
histocompatibility 2, O region beta locus precursor [Mus musculus]
271 aa protein
accession:NP_034519.2
histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 424 | 424 | 99% | 1e-150 | 75.28% | NP_034519.2 | |
| 2 | 286 | 286 | 86% | 3e-96 | 62.87% | NP_001230891.1 | |
| 3 | 112 | 112 | 78% | 2e-28 | 31.80% | XP_005168179.1 | |
| 4 | 307 | 307 | 73% | 3e-105 | 74.00% | XP_006523749.1 | |
| 5 | 285 | 285 | 92% | 1e-95 | 57.14% | NP_002115.2 |