Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_002307.2
LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
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Query length:
395 aa
DOMAINS: and other(s) domains
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LIM/homeobox protein lim-6
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LIM/homeobox protein lim-6 [Caenorhabditis elegans]
316 aa protein
accession:NP_001256980.1
LIM homeobox transcription factor 1 alpha, isoform C
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LIM homeobox transcription factor 1 alpha, isoform C [Drosophila melanogaster]
639 aa protein
accession:NP_001261754.1
LIM homeobox transcription factor 1, beta b
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LIM homeobox transcription factor 1, beta b [Danio rerio]
375 aa protein
accession:NP_001020338.2
LIM homeobox transcription factor 1-beta isoform 2
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LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
402 aa protein
accession:NP_001167618.1
Query: LIM homeobox transcription factor 1-beta isoform 1
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LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
395 aa protein
accession:NP_002307.2
LIM homeobox transcription factor 1-beta isoform X1
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LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]
408 aa protein
accession:XP_006497809.1
DOMAINS: and other(s) domains
...
LIM/homeobox protein lim-6 [Caenorhabditis elegans]
316 aa protein
accession:NP_001256980.1
LIM homeobox transcription factor 1 alpha, isoform C [Drosophila melanogaster]
639 aa protein
accession:NP_001261754.1
LIM homeobox transcription factor 1, beta b [Danio rerio]
375 aa protein
accession:NP_001020338.2
LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
402 aa protein
accession:NP_001167618.1
LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
395 aa protein
accession:NP_002307.2
LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]
408 aa protein
accession:XP_006497809.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 807 | 807 | 100% | 0.0 | 98.26% | NP_001167618.1 | |
| 2 | 800 | 800 | 100% | 0.0 | 96.81% | XP_006497809.1 | |
| 3 | 601 | 601 | 94% | 0.0 | 84.17% | NP_001020338.2 | |
| 4 | 244 | 244 | 86% | 1e-73 | 39.18% | NP_001261754.1 | |
| 5 | 194 | 194 | 57% | 1e-57 | 43.91% | NP_001256980.1 |