Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_004402.1 cytoplasmic dynein 1 intermediate chain 1 isoform a [Homo sapiens] ... Query length: 645 aa

WD_REPEATS_REGION domain-containing protein ...

WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]

639 aa protein

accession:NP_001360494.1

Alignment Sequence Identical proteins

short wing, isoform N ...

short wing, isoform N [Drosophila melanogaster]

634 aa protein

accession:NP_001285486.1

Alignment Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 2 isoform 1 ...

cytoplasmic dynein 1 intermediate chain 2 isoform 1 [Homo sapiens]

638 aa protein

accession:NP_001258714.1

Alignment Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 1 ...

cytoplasmic dynein 1 intermediate chain 1 [Danio rerio]

608 aa protein

accession:XP_021326617.1

Alignment Sequence Identical proteins

Query: cytoplasmic dynein 1 intermediate chain 1 isoform a ...

cytoplasmic dynein 1 intermediate chain 1 isoform a [Homo sapiens]

645 aa protein

accession:NP_004402.1

Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 1 isoform 6 ...

cytoplasmic dynein 1 intermediate chain 1 isoform 6 [Mus musculus]

645 aa protein

accession:NP_001396540.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001396540.1\|	cytoplasmic dynein 1 intermediate chain 1 isoform 6 [Mus musculus]	1329	1329	100%	0.0	98.14%	NP_001396540.1
2 Select seq ref\|XP_021326617.1\|	cytoplasmic dynein 1 intermediate chain 1 [Danio rerio]	991	991	99%	0.0	77.98%	XP_021326617.1
3 Select seq ref\|NP_001258714.1\|	cytoplasmic dynein 1 intermediate chain 2 isoform 1 [Homo sapiens]	950	950	100%	0.0	75.58%	NP_001258714.1
4 Select seq ref\|NP_001285486.1\|	short wing, isoform N [Drosophila melanogaster]	595	595	97%	0.0	47.38%	NP_001285486.1
5 Select seq ref\|NP_001360494.1\|	WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]	406	406	97%	8e-133	37.12%	NP_001360494.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments