Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_004706.3
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1 [Homo sapiens]
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Query length:
961 aa
DOMAINS: and other(s) domains
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hypothetical protein DDB_G0271690
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hypothetical protein DDB_G0271690 [Dictyostelium discoideum AX4]
782 aa protein
accession:XP_645475.1
TFIIF-interacting CTD phosphatase, isoform B
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TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
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RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 [Danio rerio]
915 aa protein
accession:XP_068071217.1
RNA polymerase II subunit A C-terminal domain phosphatase
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RNA polymerase II subunit A C-terminal domain phosphatase [Rattus norvegicus]
973 aa protein
accession:NP_001401324.1
Query: RNA polymerase II subunit A C-terminal domain phosphatase isoform 1
...
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1 [Homo sapiens]
961 aa protein
accession:NP_004706.3
RNA polymerase II subunit A C-terminal domain phosphatase isoform 4
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RNA polymerase II subunit A C-terminal domain phosphatase isoform 4 [Homo sapiens]
867 aa protein
accession:NP_001305440.1
DOMAINS: and other(s) domains
...
hypothetical protein DDB_G0271690 [Dictyostelium discoideum AX4]
782 aa protein
accession:XP_645475.1
TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 [Danio rerio]
915 aa protein
accession:XP_068071217.1
RNA polymerase II subunit A C-terminal domain phosphatase [Rattus norvegicus]
973 aa protein
accession:NP_001401324.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1 [Homo sapiens]
961 aa protein
accession:NP_004706.3
RNA polymerase II subunit A C-terminal domain phosphatase isoform 4 [Homo sapiens]
867 aa protein
accession:NP_001305440.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1761 | 1761 | 89% | 0.0 | 100.00% | NP_001305440.1 | |
| 2 | 1393 | 1393 | 100% | 0.0 | 76.88% | NP_001401324.1 | |
| 3 | 952 | 952 | 90% | 0.0 | 59.71% | XP_068071217.1 | |
| 4 | 298 | 429 | 46% | 3e-86 | 49.67% | NP_001286846.1 | |
| 5 | 184 | 247 | 47% | 3e-47 | 33.96% | XP_645475.1 |