Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_005868.1 splicing factor 3A subunit 1 [Homo sapiens] ... Query length: 793 aa

SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein ...

SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana]

785 aa protein

accession:NP_001117289.1

Alignment Sequence Identical proteins

splicing factor 3a subunit 1 ...

splicing factor 3a subunit 1 [Drosophila melanogaster]

784 aa protein

accession:NP_650583.1

Alignment Sequence Identical proteins

uncharacterized protein CELE_W07E6.4 ...

uncharacterized protein CELE_W07E6.4 [Caenorhabditis elegans]

655 aa protein

accession:NP_493746.1

Alignment Sequence Identical proteins

splicing factor 3A subunit 1 ...

splicing factor 3A subunit 1 [Danio rerio]

780 aa protein

accession:NP_956388.1

Alignment Sequence Identical proteins

Query: splicing factor 3A subunit 1 ...

splicing factor 3A subunit 1 [Homo sapiens]

793 aa protein

accession:NP_005868.1

Sequence Identical proteins

splicing factor 3A subunit 1 ...

splicing factor 3A subunit 1 [Mus musculus]

791 aa protein

accession:NP_080451.4

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_080451.4\|	splicing factor 3A subunit 1 [Mus musculus]	1544	1544	100%	0.0	98.11%	NP_080451.4
2 Select seq ref\|NP_956388.1\|	splicing factor 3A subunit 1 [Danio rerio]	1108	1108	100%	0.0	82.54%	NP_956388.1
3 Select seq ref\|NP_650583.1\|	splicing factor 3a subunit 1 [Drosophila melanogaster]	605	754	79%	0.0	61.65%	NP_650583.1
4 Select seq ref\|NP_493746.1\|	uncharacterized protein CELE_W07E6.4 [Caenorhabditis elegans]	441	538	84%	6e-144	43.45%	NP_493746.1
5 Select seq ref\|NP_001117289.1\|	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana]	342	342	95%	1e-104	35.34%	NP_001117289.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments