Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_006254.1 proteasome activator complex subunit 1 isoform 1 [Homo sapiens] ... Query length: 249 aa

Proteasome activator complex subunit 3 ...

Proteasome activator complex subunit 3 [Caenorhabditis elegans]

248 aa protein

accession:NP_499493.1

Alignment Sequence Identical proteins

proteasome regulator gamma, isoform B ...

proteasome regulator gamma, isoform B [Drosophila melanogaster]

245 aa protein

accession:NP_001259502.1

Alignment Sequence Identical proteins

proteasome activator complex subunit 1 ...

proteasome activator complex subunit 1 [Danio rerio]

248 aa protein

accession:NP_571450.1

Alignment Sequence Identical proteins

proteasome activator complex subunit 1 ...

proteasome activator complex subunit 1 [Mus musculus]

249 aa protein

accession:NP_035319.1

Alignment Sequence Identical proteins

Query: proteasome activator complex subunit 1 isoform 1 ...

proteasome activator complex subunit 1 isoform 1 [Homo sapiens]

249 aa protein

accession:NP_006254.1

Sequence Identical proteins

proteasome activator complex subunit 1 isoform 4 ...

proteasome activator complex subunit 1 isoform 4 [Homo sapiens]

236 aa protein

accession:NP_001268458.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_035319.1\|	proteasome activator complex subunit 1 [Mus musculus]	485	485	100%	2e-175	94.78%	NP_035319.1
2 Select seq ref\|NP_001268458.1\|	proteasome activator complex subunit 1 isoform 4 [Homo sapiens]	472	472	100%	2e-170	94.78%	NP_001268458.1
3 Select seq ref\|NP_571450.1\|	proteasome activator complex subunit 1 [Danio rerio]	282	282	100%	5e-95	56.18%	NP_571450.1
4 Select seq ref\|NP_499493.1\|	Proteasome activator complex subunit 3 [Caenorhabditis elegans]	177	177	93%	6e-54	37.08%	NP_499493.1
5 Select seq ref\|NP_001259502.1\|	proteasome regulator gamma, isoform B [Drosophila melanogaster]	176	176	95%	1e-53	38.91%	NP_001259502.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments