Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_010116.1 CCR4-NOT core subunit CDC36 [Saccharomyces cerevisiae S288C] ... Query length: 191 aa

NOT2/NOT3/NOT5 family protein ...

NOT2/NOT3/NOT5 family protein [Dictyostelium discoideum AX4]

579 aa protein

accession:XP_638512.1

Alignment Sequence Identical proteins

Query: CCR4-NOT core subunit CDC36 ...

CCR4-NOT core subunit CDC36 [Saccharomyces cerevisiae S288C]

191 aa protein

accession:NP_010116.1

Sequence Identical proteins

CCR4-Not complex subunit Not2 ...

CCR4-Not complex subunit Not2 [Schizosaccharomyces pombe]

306 aa protein

accession:NP_587823.2

Alignment Sequence Identical proteins

probable NOT transcription complex subunit VIP2 isoform X1 ...

probable NOT transcription complex subunit VIP2 isoform X1 [Glycine max]

660 aa protein

accession:XP_006590998.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 2 isoform f ...

CCR4-NOT transcription complex subunit 2 isoform f [Mus musculus]

350 aa protein

accession:NP_001346182.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 2 isoform X5 ...

CCR4-NOT transcription complex subunit 2 isoform X5 [Homo sapiens]

394 aa protein

accession:XP_024304754.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_587823.2\|	CCR4-Not complex subunit Not2 [Schizosaccharomyces pombe]	118	118	98%	3e-31	35.60%	NP_587823.2
2 Select seq ref\|XP_006590998.1\|	probable NOT transcription complex subunit VIP2 isoform X1 [Glycine max]	90.9	90.9	98%	4e-20	32.63%	XP_006590998.1
3 Select seq ref\|NP_001346182.1\|	CCR4-NOT transcription complex subunit 2 isoform f [Mus musculus]	88.2	88.2	98%	1e-19	29.17%	NP_001346182.1
4 Select seq ref\|XP_638512.1\|	NOT2/NOT3/NOT5 family protein [Dictyostelium discoideum AX4]	88.6	88.6	94%	2e-19	32.78%	XP_638512.1
5 Select seq ref\|XP_024304754.1\|	CCR4-NOT transcription complex subunit 2 isoform X5 [Homo sapiens]	87.8	87.8	98%	2e-19	29.17%	XP_024304754.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments