Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_010157.1
AAA family ATPase CDC48 [Saccharomyces cerevisiae S288C]
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Query length:
835 aa
DOMAINS: and other(s) domains
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Query: AAA family ATPase CDC48
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AAA family ATPase CDC48 [Saccharomyces cerevisiae S288C]
835 aa protein
accession:NP_010157.1
AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48
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AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48 [Schizosaccharomyces pombe]
809 aa protein
accession:NP_593287.3
transitional endoplasmic reticulum 94, isoform E
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transitional endoplasmic reticulum 94, isoform E [Drosophila melanogaster]
825 aa protein
accession:NP_001286261.1
transitional endoplasmic reticulum ATPase
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transitional endoplasmic reticulum ATPase [Danio rerio]
806 aa protein
accession:NP_958889.1
cell division cycle protein 48 homolog
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cell division cycle protein 48 homolog [Glycine max]
814 aa protein
accession:XP_003523092.1
ATPase, AAA-type, CDC48 protein
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ATPase, AAA-type, CDC48 protein [Arabidopsis thaliana]
810 aa protein
accession:NP_568114.1
DOMAINS: and other(s) domains
...
AAA family ATPase CDC48 [Saccharomyces cerevisiae S288C]
835 aa protein
accession:NP_010157.1
AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48 [Schizosaccharomyces pombe]
809 aa protein
accession:NP_593287.3
transitional endoplasmic reticulum 94, isoform E [Drosophila melanogaster]
825 aa protein
accession:NP_001286261.1
transitional endoplasmic reticulum ATPase [Danio rerio]
806 aa protein
accession:NP_958889.1
cell division cycle protein 48 homolog [Glycine max]
814 aa protein
accession:XP_003523092.1
ATPase, AAA-type, CDC48 protein [Arabidopsis thaliana]
810 aa protein
accession:NP_568114.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1258 | 1258 | 98% | 0.0 | 76.00% | NP_593287.3 | |
| 2 | 1157 | 1157 | 98% | 0.0 | 67.72% | NP_001286261.1 | |
| 3 | 1151 | 1151 | 99% | 0.0 | 66.06% | XP_003523092.1 | |
| 4 | 1145 | 1145 | 94% | 0.0 | 70.36% | NP_958889.1 | |
| 5 | 1144 | 1144 | 93% | 0.0 | 68.20% | NP_568114.1 |