Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_011066.3
RNA polymerase II subunit B1 CTD phosphatase RTR1 [Saccharomyces cerevisiae S288C]
...
Query length:
226 aa
DOMAINS: and other(s) domains
...
RNA polymerase II CTD phosphatase Rtr1
...
RNA polymerase II CTD phosphatase Rtr1 [Schizosaccharomyces pombe]
197 aa protein
accession:NP_594445.1
putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 isoform B
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putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 isoform B [Mus musculus]
568 aa protein
accession:NP_001156933.1
RNA polymerase II subunit B1 CTD phosphatase Rpap2
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RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Rattus norvegicus]
609 aa protein
accession:NP_001014009.1
putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
...
putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Homo sapiens]
612 aa protein
accession:NP_079089.2
Query: RNA polymerase II subunit B1 CTD phosphatase RTR1
...
RNA polymerase II subunit B1 CTD phosphatase RTR1 [Saccharomyces cerevisiae S288C]
226 aa protein
accession:NP_011066.3
putative protein-serine/threonine phosphatase
...
putative protein-serine/threonine phosphatase [Saccharomyces cerevisiae S288C]
196 aa protein
accession:NP_010351.1
DOMAINS: and other(s) domains
...
RNA polymerase II CTD phosphatase Rtr1 [Schizosaccharomyces pombe]
197 aa protein
accession:NP_594445.1
putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 isoform B [Mus musculus]
568 aa protein
accession:NP_001156933.1
RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Rattus norvegicus]
609 aa protein
accession:NP_001014009.1
putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Homo sapiens]
612 aa protein
accession:NP_079089.2
RNA polymerase II subunit B1 CTD phosphatase RTR1 [Saccharomyces cerevisiae S288C]
226 aa protein
accession:NP_011066.3
putative protein-serine/threonine phosphatase [Saccharomyces cerevisiae S288C]
196 aa protein
accession:NP_010351.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 105 | 105 | 80% | 1e-26 | 35.36% | NP_010351.1 | |
| 2 | 58.9 | 58.9 | 40% | 9e-09 | 35.11% | NP_001156933.1 | |
| 3 | 57.4 | 57.4 | 37% | 3e-08 | 32.94% | NP_079089.2 | |
| 4 | 57.0 | 57.0 | 40% | 4e-08 | 34.04% | NP_001014009.1 | |
| 5 | 53.9 | 53.9 | 44% | 2e-07 | 35.24% | NP_594445.1 |