Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_011388.1
mediator complex subunit SOH1 [Saccharomyces cerevisiae S288C]
...
Query length:
127 aa
DOMAINS: and other(s) domains
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SOH1 family protein
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SOH1 family protein [Arabidopsis thaliana]
196 aa protein
accession:NP_197491.2
Query: mediator complex subunit SOH1
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mediator complex subunit SOH1 [Saccharomyces cerevisiae S288C]
127 aa protein
accession:NP_011388.1
Mediator of RNA polymerase II transcription subunit 31
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Mediator of RNA polymerase II transcription subunit 31 [Caenorhabditis elegans]
165 aa protein
accession:NP_001250948.1
mediator of RNA polymerase II transcription subunit 31
...
mediator of RNA polymerase II transcription subunit 31 [Homo sapiens]
131 aa protein
accession:NP_057144.1
mediator of RNA polymerase II transcription subunit 31
...
mediator of RNA polymerase II transcription subunit 31 [Mus musculus]
131 aa protein
accession:NP_080344.2
mediator of RNA polymerase II transcription subunit 31
...
mediator of RNA polymerase II transcription subunit 31 [Rattus norvegicus]
131 aa protein
accession:NP_001129285.1
DOMAINS: and other(s) domains
...
SOH1 family protein [Arabidopsis thaliana]
196 aa protein
accession:NP_197491.2
mediator complex subunit SOH1 [Saccharomyces cerevisiae S288C]
127 aa protein
accession:NP_011388.1
Mediator of RNA polymerase II transcription subunit 31 [Caenorhabditis elegans]
165 aa protein
accession:NP_001250948.1
mediator of RNA polymerase II transcription subunit 31 [Homo sapiens]
131 aa protein
accession:NP_057144.1
mediator of RNA polymerase II transcription subunit 31 [Mus musculus]
131 aa protein
accession:NP_080344.2
mediator of RNA polymerase II transcription subunit 31 [Rattus norvegicus]
131 aa protein
accession:NP_001129285.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 70.1 | 70.1 | 52% | 9e-15 | 49.25% | NP_001250948.1 | |
| 2 | 66.2 | 66.2 | 61% | 1e-13 | 43.59% | NP_057144.1 | |
| 3 | 65.5 | 65.5 | 61% | 3e-13 | 43.59% | NP_080344.2 | |
| 4 | 65.5 | 65.5 | 61% | 3e-13 | 43.59% | NP_001129285.1 | |
| 5 | 65.9 | 65.9 | 50% | 7e-13 | 51.56% | NP_197491.2 |