Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_011892.1
proteasome regulatory particle base subunit RPN1 [Saccharomyces cerevisiae S288C]
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Query length:
993 aa
DOMAINS: and other(s) domains
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Query: proteasome regulatory particle base subunit RPN1
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proteasome regulatory particle base subunit RPN1 [Saccharomyces cerevisiae S288C]
993 aa protein
accession:NP_011892.1
19S proteasome regulatory subunit Rpn1/Mts4
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19S proteasome regulatory subunit Rpn1/Mts4 [Schizosaccharomyces pombe]
891 aa protein
accession:NP_596171.1
26S proteasome non-ATPase regulatory subunit 2 homolog A
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26S proteasome non-ATPase regulatory subunit 2 homolog A [Glycine max]
885 aa protein
accession:XP_003527419.1
26S proteasome regulatory subunit S2
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26S proteasome regulatory subunit S2 [Dictyostelium discoideum AX4]
893 aa protein
accession:XP_628968.1
26S proteasome non-ATPase regulatory subunit 2
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26S proteasome non-ATPase regulatory subunit 2 [Danio rerio]
897 aa protein
accession:NP_956840.1
26S proteasome non-ATPase regulatory subunit 2
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26S proteasome non-ATPase regulatory subunit 2 [Mus musculus]
908 aa protein
accession:NP_598862.1
DOMAINS: and other(s) domains
...
proteasome regulatory particle base subunit RPN1 [Saccharomyces cerevisiae S288C]
993 aa protein
accession:NP_011892.1
19S proteasome regulatory subunit Rpn1/Mts4 [Schizosaccharomyces pombe]
891 aa protein
accession:NP_596171.1
26S proteasome non-ATPase regulatory subunit 2 homolog A [Glycine max]
885 aa protein
accession:XP_003527419.1
26S proteasome regulatory subunit S2 [Dictyostelium discoideum AX4]
893 aa protein
accession:XP_628968.1
26S proteasome non-ATPase regulatory subunit 2 [Danio rerio]
897 aa protein
accession:NP_956840.1
26S proteasome non-ATPase regulatory subunit 2 [Mus musculus]
908 aa protein
accession:NP_598862.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 674 | 674 | 96% | 0.0 | 40.62% | NP_596171.1 | |
| 2 | 565 | 565 | 96% | 0.0 | 35.34% | XP_003527419.1 | |
| 3 | 533 | 533 | 95% | 5e-174 | 35.48% | XP_628968.1 | |
| 4 | 503 | 801 | 87% | 5e-162 | 42.31% | NP_956840.1 | |
| 5 | 492 | 788 | 86% | 5e-158 | 41.88% | NP_598862.1 |