Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_012123.1
TFIIH/NER complex ATPase/helicase subunit SSL2 [Saccharomyces cerevisiae S288C]
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Query length:
843 aa
DOMAINS: and other(s) domains
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general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X2
...
general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X2 [Glycine max]
204 aa protein
accession:XP_040868111.1
Query: TFIIH/NER complex ATPase/helicase subunit SSL2
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TFIIH/NER complex ATPase/helicase subunit SSL2 [Saccharomyces cerevisiae S288C]
843 aa protein
accession:NP_012123.1
transcription factor IIH subunit
...
transcription factor IIH subunit [Dictyostelium discoideum AX4]
800 aa protein
accession:XP_647819.1
TFIIH basal transcription factor complex helicase XPB subunit, putative
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TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium falciparum 3D7]
886 aa protein
accession:XP_001347653.1
DNA repair helicase XPB
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DNA repair helicase XPB [Mycobacterium tuberculosis]
542 aa protein
accession:WP_003404428.1
DEAD/DEAH box helicase
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DEAD/DEAH box helicase [Sulfolobus acidocaldarius]
444 aa protein
accession:WP_238375753.1
DOMAINS: and other(s) domains
...
general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X2 [Glycine max]
204 aa protein
accession:XP_040868111.1
TFIIH/NER complex ATPase/helicase subunit SSL2 [Saccharomyces cerevisiae S288C]
843 aa protein
accession:NP_012123.1
transcription factor IIH subunit [Dictyostelium discoideum AX4]
800 aa protein
accession:XP_647819.1
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium falciparum 3D7]
886 aa protein
accession:XP_001347653.1
DNA repair helicase XPB [Mycobacterium tuberculosis]
542 aa protein
accession:WP_003404428.1
DEAD/DEAH box helicase [Sulfolobus acidocaldarius]
444 aa protein
accession:WP_238375753.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 823 | 823 | 84% | 0.0 | 55.69% | XP_647819.1 | |
| 2 | 469 | 606 | 72% | 1e-151 | 50.43% | XP_001347653.1 | |
| 3 | 254 | 254 | 71% | 5e-74 | 30.23% | WP_003404428.1 | |
| 4 | 155 | 155 | 44% | 9e-40 | 29.73% | WP_238375753.1 | |
| 5 | 109 | 109 | 9% | 4e-26 | 64.10% | XP_040868111.1 |