Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_012226.3 CCR4-NOT core subunit NOT3 [Saccharomyces cerevisiae S288C] ... Query length: 836 aa

Query: CCR4-NOT core subunit NOT3 ...

CCR4-NOT core subunit NOT3 [Saccharomyces cerevisiae S288C]

836 aa protein

accession:NP_012226.3

Sequence Identical proteins

CCR4-Not complex subunit Not3/5 ...

CCR4-Not complex subunit Not3/5 [Schizosaccharomyces pombe]

640 aa protein

accession:NP_594789.2

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 3b ...

CCR4-NOT transcription complex subunit 3b [Danio rerio]

908 aa protein

accession:NP_956134.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 3 isoform X7 ...

CCR4-NOT transcription complex subunit 3 isoform X7 [Homo sapiens]

682 aa protein

accession:XP_011525295.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 3 isoform X7 ...

CCR4-NOT transcription complex subunit 3 isoform X7 [Mus musculus]

752 aa protein

accession:XP_006539815.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 3, isoform B ...

CCR4-NOT transcription complex subunit 3, isoform B [Drosophila melanogaster]

844 aa protein

accession:NP_001260712.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_594789.2\|	CCR4-Not complex subunit Not3/5 [Schizosaccharomyces pombe]	201	258	37%	6e-54	45.26%	NP_594789.2
2 Select seq ref\|NP_956134.1\|	CCR4-NOT transcription complex subunit 3b [Danio rerio]	196	196	27%	8e-51	40.87%	NP_956134.1
3 Select seq ref\|XP_011525295.1\|	CCR4-NOT transcription complex subunit 3 isoform X7 [Homo sapiens]	191	191	27%	7e-50	40.43%	XP_011525295.1
4 Select seq ref\|XP_006539815.1\|	CCR4-NOT transcription complex subunit 3 isoform X7 [Mus musculus]	187	187	27%	2e-48	40.00%	XP_006539815.1
5 Select seq ref\|NP_001260712.1\|	CCR4-NOT transcription complex subunit 3, isoform B [Drosophila melanogaster]	183	183	27%	1e-46	42.06%	NP_001260712.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments