Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_012864.1
cleavage polyadenylation factor subunit MPE1 [Saccharomyces cerevisiae S288C]
...
Query length:
441 aa
DOMAINS: and other(s) domains
...
E3 ubiquitin-protein ligase RBBP6 isoform X2
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E3 ubiquitin-protein ligase RBBP6 isoform X2 [Rattus norvegicus]
1789 aa protein
accession:XP_219296.3
E3 ubiquitin-protein ligase RBBP6 isoform 1
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E3 ubiquitin-protein ligase RBBP6 isoform 1 [Mus musculus]
1790 aa protein
accession:NP_035377.2
E3 ubiquitin-protein ligase RBBP6 isoform 1
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E3 ubiquitin-protein ligase RBBP6 isoform 1 [Homo sapiens]
1792 aa protein
accession:NP_008841.2
E3 ubiquitin-protein ligase RBBP6 isoform X3
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E3 ubiquitin-protein ligase RBBP6 isoform X3 [Danio rerio]
1757 aa protein
accession:XP_005164077.1
Query: cleavage polyadenylation factor subunit MPE1
...
cleavage polyadenylation factor subunit MPE1 [Saccharomyces cerevisiae S288C]
441 aa protein
accession:NP_012864.1
RBBP6 family ubiquitin-protein ligase E3
...
RBBP6 family ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]
482 aa protein
accession:NP_001342771.1
DOMAINS: and other(s) domains
...
E3 ubiquitin-protein ligase RBBP6 isoform X2 [Rattus norvegicus]
1789 aa protein
accession:XP_219296.3
E3 ubiquitin-protein ligase RBBP6 isoform 1 [Mus musculus]
1790 aa protein
accession:NP_035377.2
E3 ubiquitin-protein ligase RBBP6 isoform 1 [Homo sapiens]
1792 aa protein
accession:NP_008841.2
E3 ubiquitin-protein ligase RBBP6 isoform X3 [Danio rerio]
1757 aa protein
accession:XP_005164077.1
cleavage polyadenylation factor subunit MPE1 [Saccharomyces cerevisiae S288C]
441 aa protein
accession:NP_012864.1
RBBP6 family ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]
482 aa protein
accession:NP_001342771.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 312 | 312 | 95% | 9e-101 | 39.82% | NP_001342771.1 | |
| 2 | 159 | 159 | 79% | 9e-41 | 30.73% | XP_219296.3 | |
| 3 | 159 | 159 | 79% | 9e-41 | 30.73% | NP_035377.2 | |
| 4 | 157 | 157 | 79% | 4e-40 | 30.42% | NP_008841.2 | |
| 5 | 153 | 153 | 79% | 1e-38 | 28.49% | XP_005164077.1 |