Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_013348.1
E3 ubiquitin-protein ligase IRC20 [Saccharomyces cerevisiae S288C]
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Query length:
1556 aa
DOMAINS: and other(s) domains
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Query: E3 ubiquitin-protein ligase IRC20
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E3 ubiquitin-protein ligase IRC20 [Saccharomyces cerevisiae S288C]
1556 aa protein
accession:NP_013348.1
ATP-dependent DNA helicase
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ATP-dependent DNA helicase [Schizosaccharomyces pombe]
1375 aa protein
accession:NP_001342916.1
E3 ubiquitin-protein ligase SHPRH isoform X4
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E3 ubiquitin-protein ligase SHPRH isoform X4 [Danio rerio]
1643 aa protein
accession:XP_021328751.1
RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein
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RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]
1664 aa protein
accession:NP_001325178.1
transcription termination factor 2 isoform X2
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transcription termination factor 2 isoform X2 [Mus musculus]
1135 aa protein
accession:XP_036019253.1
transcription termination factor 2 isoform X3
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transcription termination factor 2 isoform X3 [Homo sapiens]
1183 aa protein
accession:XP_047288091.1
DOMAINS: and other(s) domains
...
E3 ubiquitin-protein ligase IRC20 [Saccharomyces cerevisiae S288C]
1556 aa protein
accession:NP_013348.1
ATP-dependent DNA helicase [Schizosaccharomyces pombe]
1375 aa protein
accession:NP_001342916.1
E3 ubiquitin-protein ligase SHPRH isoform X4 [Danio rerio]
1643 aa protein
accession:XP_021328751.1
RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]
1664 aa protein
accession:NP_001325178.1
transcription termination factor 2 isoform X2 [Mus musculus]
1135 aa protein
accession:XP_036019253.1
transcription termination factor 2 isoform X3 [Homo sapiens]
1183 aa protein
accession:XP_047288091.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 246 | 246 | 77% | 5e-65 | 23.83% | NP_001342916.1 | |
| 2 | 111 | 169 | 34% | 2e-23 | 26.26% | XP_036019253.1 | |
| 3 | 105 | 170 | 29% | 1e-21 | 25.71% | XP_047288091.1 | |
| 4 | 99.4 | 239 | 46% | 1e-19 | 27.36% | XP_021328751.1 | |
| 5 | 95.9 | 229 | 44% | 1e-18 | 27.95% | NP_001325178.1 |