Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_013967.1 U2 snRNP complex subunit CUS1 [Saccharomyces cerevisiae S288C] ... Query length: 436 aa

Query: U2 snRNP complex subunit CUS1 ...

U2 snRNP complex subunit CUS1 [Saccharomyces cerevisiae S288C]

436 aa protein

accession:NP_013967.1

Sequence Identical proteins

PSP proline-rich domain-containing protein ...

PSP proline-rich domain-containing protein [Caenorhabditis elegans]

602 aa protein

accession:NP_001370858.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 2 isoform X2 ...

splicing factor 3B subunit 2 isoform X2 [Rattus norvegicus]

877 aa protein

accession:XP_008758327.2

Alignment Sequence Identical proteins

splicing factor 3B subunit 2 isoform 2 ...

splicing factor 3B subunit 2 isoform 2 [Mus musculus]

877 aa protein

accession:NP_001349383.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 2 isoform X1 ...

splicing factor 3B subunit 2 isoform X1 [Homo sapiens]

894 aa protein

accession:XP_011543042.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 2 isoform X2 ...

splicing factor 3B subunit 2 isoform X2 [Glycine max]

577 aa protein

accession:XP_003541544.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001370858.1\|	PSP proline-rich domain-containing protein [Caenorhabditis elegans]	178	178	67%	2e-48	34.19%	NP_001370858.1
2 Select seq ref\|XP_003541544.1\|	splicing factor 3B subunit 2 isoform X2 [Glycine max]	171	171	64%	4e-46	34.63%	XP_003541544.1
3 Select seq ref\|XP_008758327.2\|	splicing factor 3B subunit 2 isoform X2 [Rattus norvegicus]	171	171	49%	8e-45	41.44%	XP_008758327.2
4 Select seq ref\|XP_011543042.1\|	splicing factor 3B subunit 2 isoform X1 [Homo sapiens]	171	171	49%	8e-45	41.44%	XP_011543042.1
5 Select seq ref\|NP_001349383.1\|	splicing factor 3B subunit 2 isoform 2 [Mus musculus]	170	170	49%	9e-45	41.44%	NP_001349383.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments