Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_014837.1
transcription initiation factor IIA large subunit [Saccharomyces cerevisiae S288C]
...
Query length:
286 aa
DOMAINS: and other(s) domains
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transcription initiation factor IIA subunit 1 isoform 3
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transcription initiation factor IIA subunit 1 isoform 3 [Homo sapiens]
326 aa protein
accession:NP_001265869.1
transcription initiation factor IIA subunit 1 isoform X1
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transcription initiation factor IIA subunit 1 isoform X1 [Mus musculus]
328 aa protein
accession:XP_017170749.1
TFIIA-alpha and beta-like factor
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TFIIA-alpha and beta-like factor [Danio rerio]
376 aa protein
accession:NP_001070039.1
transcription initiation factor IIA large subunit isoform X2
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transcription initiation factor IIA large subunit isoform X2 [Glycine max]
391 aa protein
accession:XP_003543527.1
Query: transcription initiation factor IIA large subunit
...
transcription initiation factor IIA large subunit [Saccharomyces cerevisiae S288C]
286 aa protein
accession:NP_014837.1
putative transcription factor TFIIA complex large subunit Toa1
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putative transcription factor TFIIA complex large subunit Toa1 [Schizosaccharomyces pombe]
369 aa protein
accession:NP_595670.1
DOMAINS: and other(s) domains
...
transcription initiation factor IIA subunit 1 isoform 3 [Homo sapiens]
326 aa protein
accession:NP_001265869.1
transcription initiation factor IIA subunit 1 isoform X1 [Mus musculus]
328 aa protein
accession:XP_017170749.1
TFIIA-alpha and beta-like factor [Danio rerio]
376 aa protein
accession:NP_001070039.1
transcription initiation factor IIA large subunit isoform X2 [Glycine max]
391 aa protein
accession:XP_003543527.1
transcription initiation factor IIA large subunit [Saccharomyces cerevisiae S288C]
286 aa protein
accession:NP_014837.1
putative transcription factor TFIIA complex large subunit Toa1 [Schizosaccharomyces pombe]
369 aa protein
accession:NP_595670.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 68.6 | 129 | 43% | 9e-12 | 46.48% | NP_595670.1 | |
| 2 | 63.9 | 63.9 | 21% | 2e-10 | 47.54% | NP_001265869.1 | |
| 3 | 63.9 | 63.9 | 21% | 3e-10 | 47.54% | XP_017170749.1 | |
| 4 | 61.2 | 103 | 36% | 2e-09 | 50.91% | NP_001070039.1 | |
| 5 | 60.8 | 60.8 | 15% | 3e-09 | 55.56% | XP_003543527.1 |