Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_014867.1
DNA-directed RNA polymerase core subunit RPB8 [Saccharomyces cerevisiae S288C]
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Query length:
146 aa
DOMAINS: and other(s) domains
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Query: DNA-directed RNA polymerase core subunit RPB8
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DNA-directed RNA polymerase core subunit RPB8 [Saccharomyces cerevisiae S288C]
146 aa protein
accession:NP_014867.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3
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DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Danio rerio]
150 aa protein
accession:NP_001017600.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2
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DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2 [Homo sapiens]
150 aa protein
accession:NP_001376505.1
RNA polymerase II, I and III subunit H
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RNA polymerase II, I and III subunit H [Drosophila melanogaster]
149 aa protein
accession:NP_649352.1
RNA polymerase Rpb8
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RNA polymerase Rpb8 [Arabidopsis thaliana]
146 aa protein
accession:NP_175827.1
RNA polymerase II core subunit
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RNA polymerase II core subunit [Dictyostelium discoideum AX4]
142 aa protein
accession:XP_642084.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase core subunit RPB8 [Saccharomyces cerevisiae S288C]
146 aa protein
accession:NP_014867.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Danio rerio]
150 aa protein
accession:NP_001017600.1
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform 2 [Homo sapiens]
150 aa protein
accession:NP_001376505.1
RNA polymerase II, I and III subunit H [Drosophila melanogaster]
149 aa protein
accession:NP_649352.1
RNA polymerase Rpb8 [Arabidopsis thaliana]
146 aa protein
accession:NP_175827.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
142 aa protein
accession:XP_642084.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 93.2 | 93.2 | 100% | 1e-23 | 35.71% | NP_001017600.1 | |
| 2 | 90.5 | 90.5 | 97% | 1e-22 | 35.37% | NP_175827.1 | |
| 3 | 86.7 | 86.7 | 100% | 4e-21 | 35.06% | NP_001376505.1 | |
| 4 | 86.3 | 86.3 | 100% | 5e-21 | 34.84% | NP_649352.1 | |
| 5 | 84.7 | 84.7 | 100% | 2e-20 | 36.00% | XP_642084.1 |