Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_015335.1
DNA-directed RNA polymerase I core subunit RPA135 [Saccharomyces cerevisiae S288C]
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Query length:
1203 aa
DOMAINS: and other(s) domains
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RNA polymerase I, second largest subunit
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RNA polymerase I, second largest subunit [Dictyostelium discoideum AX4]
1130 aa protein
accession:XP_629008.1
DNA-directed RNA polymerase I subunit RPA2
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DNA-directed RNA polymerase I subunit RPA2 [Rattus norvegicus]
1135 aa protein
accession:NP_113961.2
DNA-directed RNA polymerase I subunit RPA2
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DNA-directed RNA polymerase I subunit RPA2 [Mus musculus]
1135 aa protein
accession:NP_033112.2
DNA-directed RNA polymerase I subunit RPA2
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DNA-directed RNA polymerase I subunit RPA2 [Danio rerio]
1132 aa protein
accession:NP_956812.2
Query: DNA-directed RNA polymerase I core subunit RPA135
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DNA-directed RNA polymerase I core subunit RPA135 [Saccharomyces cerevisiae S288C]
1203 aa protein
accession:NP_015335.1
DNA-directed RNA polymerase I complex subunit Rpa2
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DNA-directed RNA polymerase I complex subunit Rpa2 [Schizosaccharomyces pombe]
1174 aa protein
accession:NP_595819.2
DOMAINS: and other(s) domains
...
RNA polymerase I, second largest subunit [Dictyostelium discoideum AX4]
1130 aa protein
accession:XP_629008.1
DNA-directed RNA polymerase I subunit RPA2 [Rattus norvegicus]
1135 aa protein
accession:NP_113961.2
DNA-directed RNA polymerase I subunit RPA2 [Mus musculus]
1135 aa protein
accession:NP_033112.2
DNA-directed RNA polymerase I subunit RPA2 [Danio rerio]
1132 aa protein
accession:NP_956812.2
DNA-directed RNA polymerase I core subunit RPA135 [Saccharomyces cerevisiae S288C]
1203 aa protein
accession:NP_015335.1
DNA-directed RNA polymerase I complex subunit Rpa2 [Schizosaccharomyces pombe]
1174 aa protein
accession:NP_595819.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1561 | 1561 | 98% | 0.0 | 62.43% | NP_595819.2 | |
| 2 | 1000 | 1000 | 96% | 0.0 | 44.45% | XP_629008.1 | |
| 3 | 959 | 959 | 97% | 0.0 | 43.18% | NP_113961.2 | |
| 4 | 952 | 952 | 97% | 0.0 | 42.99% | NP_033112.2 | |
| 5 | 930 | 930 | 97% | 0.0 | 43.34% | NP_956812.2 |